Gene Suden_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0292 
SymbolrpsC 
ID3764687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand+ 
Start bp306625 
End bp307350 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content38% 
IMG OID 
Product30S ribosomal protein S3 
Protein accessionYP_392808 
Protein GI78776493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00457089 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAAA AAGTTAATCC TATTGGTTTA CGTCTTGGTA TCAATCGTAA TTGGGAAAGC 
AGATGGTTTC CTAACTTTAA GACTGCAGCA GCATACTTAG GTGAAGATCA CAAGATTCGT 
ACATATTTGA AAAAAGAACT TTACTATGCT GGTGTTTCTA ACATAGTTAT TGAAAGAACA 
GCAAAAAGAT TACGTGTAAC TATTATTGCT GCTCGTCCTG GTATTATTAT CGGTAAAAAA 
GGTTCAGATA TCGAAAAGCT TAAAGATACT CTTCAAGCTC TTGTAGGTAA GCCTTTATCA 
GTAAATATTA AAGAAGAGAA AAAAGCTCAA ATTTCTTCTC AACTTGTTGC AGAAAATGTA 
GCTACACAGT TAGAGCGCCG TGTTGCATTT AGACGTGCTA TGAAAAAAGT TATGCAAAAT 
GCACAAAGAG GCGGAGCTAA AGGTATTAAG GTATCTGTGA GTGGTCGTCT TGGTGGAGCT 
GAAATGGCTC GTACAGAGTG GTATTTAGAG GGACGTGTTC CACTTCATAC ACTTCGTGCA 
AAAATTGATT ATGGTTTTGC TGAAGCACAC ACTACATACG GTTGTATAGG TGTAAAAGTT 
TGGATATTTA AAGGTGAAGT TCTCACTAAA GGTATTCCTG CTGAAGTAAA AGAAGAGCAA 
CAAAAAGAGG GTGCGCGTCG TCCTAAACGT GCTCCTAAAC GTGAAAATAG CGGAAAGGCG 
GAATAA
 
Protein sequence
MGQKVNPIGL RLGINRNWES RWFPNFKTAA AYLGEDHKIR TYLKKELYYA GVSNIVIERT 
AKRLRVTIIA ARPGIIIGKK GSDIEKLKDT LQALVGKPLS VNIKEEKKAQ ISSQLVAENV 
ATQLERRVAF RRAMKKVMQN AQRGGAKGIK VSVSGRLGGA EMARTEWYLE GRVPLHTLRA 
KIDYGFAEAH TTYGCIGVKV WIFKGEVLTK GIPAEVKEEQ QKEGARRPKR APKRENSGKA 
E