Gene Suden_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0248 
Symbol 
ID3764643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp263206 
End bp266403 
Gene Length3198 bp 
Protein Length1065 aa 
Translation table11 
GC content36% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_392764 
Protein GI78776449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTA TTTTCAGATT ACTCTTTATT ACTCTAGCAA CTCTCTCCTC TCTTTATTCT 
GAGCAACTTC AAAAAGTCTC ACTTCAGCTT CAATGGTTTG ATCAGTTTCA GTTTGCTGGG
TATTATGTTG CAAAAGAAAA AGGCTTCTAT GAAGATGCTG GACTAGATGT TAGTTTACTA
AAATTTGAGA ACTCGATACT CCCAATAAAG AGCATCCTCT CAGGCAGTGC TACTTACGGA
GTTGGAAGAT CAAATCTTAT TATTGAGAAG AGCAACGGTA AAAGTGTTGT GCTCTTAGCA
TCCATCCTCC AATCCTCCGC ATCCGTCTTT GTAACAACAA AAGATTCAAA TATCAGCACT
GTAAAAGACT TTGTTGGCAA ACGAATTATG CTTAGCGATG ATGTTGTCTC AGACCTTGGA
CTAAGAGCCA TGATAAATAA AAAAAATGTT CCAACTGGCA ATATAGTTGT GCAAAAAAAC
TCATTTGACA TCAATGATTT GATAAACCAT AAAACAGATT TGATGGCTGC TTATCTCTCA
AATGAGCCTT TTTTACTGGA ACAAAAAGGG GTTAAATATA CTATTTTTGA TCCCAAAGAT
TATGGTCTAG ATGTTTATAG CGACATACTC TTTACAAGCC AAGAGGAGAT GAACAACAAC
CCACAGCGTG TAGAAGCTTT TACACAGGCA TCATTAAAAG GGTGGCGATA TGCTTTTGAG
AATATTGAAG AAACAGTTGC ACTCATTTTA GAAAAATACA ATTCTCAAAA CAAATCCAAA
GAAGCCCTTC TTTATGAAGC TGCTGTTCTA AAAAAACTCG CCTACGCCAA CGGTGCAGAG
TTGGGTCAGC TAGATATGAC AAAAATAGAG AAGATTTATG ACTACTACAG CAGCATGGGC
TTAATCGAAA AAAAGATAGA TTTTAAAAGT TTTGTGTATC AAGTAAAAAA ACCACAGATT
TCATTTTCAG AGCAAGAGCG AGAGTTTATT TTAAAACACC CAGAAATACT CTTGAGTGAT
GTGCAGTGGG AACCATTTTC TAGCATAAGT GGTGGAAACA ATAGTGGTGT TTTTAAAGAG
TATTATGATG AGATACAAAA AGTATCTGGA TTGAAATTCT CTTTTGTGCA AATAGGCAAC
GCAGAGAACT TTCAACTCGT TCTCGATGCG CTAAAAGAGA AAAAGATTGA TATGATTGAT
GGAACAGGAA AAACAGATGC AAGGGGCGAA TATGCACTCT TTGCGGGACC TTTTATGCAA
GTTTCACTAG GTATTGCTTC TTTGCGTGAT AATCCATACA CCACACTCAA CTCTCTTGAA
TCAAAAAAAA TCGCCATGGC ATCAGGGGGA ACGGCTATGG AGTTTATATA CCAACACTTT
AAAAACGCCA AAATTTATGA AACAGAGTCA GTCGATAAAG CACTCAGCCT TTTATCTCAT
CGTAAAATTG ATGCTGTCAT AGATAATTTG GCAGTGGTTG ATTATGGTAT CTTGAGATAC
AATAACTCAA ATCTGCTCAC AACACAAATT GATGACTATG ATTTTAAAAT TTATGCTCTT
ATTCGCTCAG ACTACCCTCT TTTGCAAAGC ATCATGCAAA AATCCATAGA ATATATCCGC
TCTCAAGAAG AGATAAAAAT TAATAATACA ATCATCAATG ATGCACTCTA TCGTGTGCCA
AAACAGGTTT CACTCTCTAT TGCTCAAAAG CAGTATCTAA GTGAGAAAAA AGAGATTACC
ATGTGTGTTG ATCCTGAGTG GGAACCGTTT GAGAGCATAG ATGAAAAAGG GGTTCATCAG
GGAATTGCAG CTGATTTGAT TCGTCTTGTT TCTGAGCGAA CAGGAGTTGC TATAAAACTG
ATTAAGACTG CGACATGGGA AGAGTCTTTA GAATTATCTA AAACAAATAA GTGTGATATT
TTGAGCTTTC TCAATCAAAC ACCACAAAGA GAACAGTGGC TTATTTTTAG TGACACGCTT
TTATCCGACC CCAATGTTAT TATTACGCGA GAGGATCACC CTTATGTTGT AAATTTAAGT
GAAGTTCATA ACGAAACAGT TGCTTTGCCT CAGGGAACTA TGTTAGAGGA GCGTCTTAGA
AAAGATTTTC CATCCCTAAA GATAATTTCA GCAAAAACTG AAGAAGAGTC TATGTCGATG
GTTTCACAAA AAAAAGCAGA TATGACTATC CGTTCTTTGA TTGTCTCTGC AAATGCCATT
AGAAAAGAGG GTCTTTTTAA TCTCAAAATA GCAGGTCAAC CAAACAACTA CGAAAATATA
TTTTCTATAG GTGTGCTTAA GAGCGAACCT ATATTAATCT CTATTCTCAA CAAGGGAATA
CACAGTATAA CAGACGAAGA AAAAGAACAA ATCGTTAACA AACACACAGC TATAGTACTC
CAAAAAGAAT CTGATGAAAA AGTACTCAAG GCAGCATTTT ATGGAACAAT CTTTCTCCTT
ATGGTTTTAG CTCTTATCTC TCTATGGAAC ACTCTTTTGA GAAAAAAAGT AAAACAAGAG
GTTACGAAAA ATATTGAGAT TAAGGAGCAG TTATTTCAAA AGAGTAAACA AGCTGAGATT
GGCAACCTAA TAGCTGGAAT CTCGCATCAG TGGCGAGAAC CGCTCTCAAA ACTAAGTTCT
ATAAATCTCA TAACTATTGC AAAGCTGAAA AATGGCATCC CGATAGATAA TGAAACTATG
CTAAAGCAGA GTGATGAGAT AGAAAAAACG ATTGATTTTA TGTCTGTAAC TATGCAAAAC
TTTTTGATGT TTTACAAAAA AAGCACAACA AAAATCAACT TCTCTGCTCT AAAATCTATA
GAAGCTTCAC TCTCCATAAT CGAGACAAAA CTTATAGACA ACAGTGTAAC TATGGAGATA
AATGGAGATG AAGGCATCCT ACTTTACGGC ATAGAAAACG AGTGGATGCA GGTATGGCTA
AATCTCATCA ACAACTCAAT CGCAATCTTT ATAGAGAGAA AAATTGCTAC TTCAAAAATA
ACCATCAACG TAACAAATGA AAAAATTACT TTTTGTGATA ATGGAGGAGG TATGAACATG
GAGCAAAAAC ATCATGGACT AGGAATCAAC ATGTGCCATG ACATAGTTTC AAAGTATGAG
AAAACTTTTC ATCTGCAAAA CTTTGAAAAT GGAATCTGTG CAACGATTTT GCTAATGAAT
ATTAAAACGA AATCCTAA
 
Protein sequence
MQFIFRLLFI TLATLSSLYS EQLQKVSLQL QWFDQFQFAG YYVAKEKGFY EDAGLDVSLL 
KFENSILPIK SILSGSATYG VGRSNLIIEK SNGKSVVLLA SILQSSASVF VTTKDSNIST
VKDFVGKRIM LSDDVVSDLG LRAMINKKNV PTGNIVVQKN SFDINDLINH KTDLMAAYLS
NEPFLLEQKG VKYTIFDPKD YGLDVYSDIL FTSQEEMNNN PQRVEAFTQA SLKGWRYAFE
NIEETVALIL EKYNSQNKSK EALLYEAAVL KKLAYANGAE LGQLDMTKIE KIYDYYSSMG
LIEKKIDFKS FVYQVKKPQI SFSEQEREFI LKHPEILLSD VQWEPFSSIS GGNNSGVFKE
YYDEIQKVSG LKFSFVQIGN AENFQLVLDA LKEKKIDMID GTGKTDARGE YALFAGPFMQ
VSLGIASLRD NPYTTLNSLE SKKIAMASGG TAMEFIYQHF KNAKIYETES VDKALSLLSH
RKIDAVIDNL AVVDYGILRY NNSNLLTTQI DDYDFKIYAL IRSDYPLLQS IMQKSIEYIR
SQEEIKINNT IINDALYRVP KQVSLSIAQK QYLSEKKEIT MCVDPEWEPF ESIDEKGVHQ
GIAADLIRLV SERTGVAIKL IKTATWEESL ELSKTNKCDI LSFLNQTPQR EQWLIFSDTL
LSDPNVIITR EDHPYVVNLS EVHNETVALP QGTMLEERLR KDFPSLKIIS AKTEEESMSM
VSQKKADMTI RSLIVSANAI RKEGLFNLKI AGQPNNYENI FSIGVLKSEP ILISILNKGI
HSITDEEKEQ IVNKHTAIVL QKESDEKVLK AAFYGTIFLL MVLALISLWN TLLRKKVKQE
VTKNIEIKEQ LFQKSKQAEI GNLIAGISHQ WREPLSKLSS INLITIAKLK NGIPIDNETM
LKQSDEIEKT IDFMSVTMQN FLMFYKKSTT KINFSALKSI EASLSIIETK LIDNSVTMEI
NGDEGILLYG IENEWMQVWL NLINNSIAIF IERKIATSKI TINVTNEKIT FCDNGGGMNM
EQKHHGLGIN MCHDIVSKYE KTFHLQNFEN GICATILLMN IKTKS