Gene Suden_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0243 
Symbol 
ID3764638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp257213 
End bp259519 
Gene Length2307 bp 
Protein Length768 aa 
Translation table11 
GC content40% 
IMG OID 
Producthemolysin-type calcium-binding region 
Protein accessionYP_392759 
Protein GI78776444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTAG ATACAGATAA TACAGGTTGG GAGATGATTG GTGAACAAAT AGTTAATAAT 
TCTTCAGTAT CTCCACAAAT AGAAATTTTC GGAAATCAAG TTTATGTGGC GTACCGAAAT
ACAAATACAA GTCTTACAGT AAAAACACTC AATTTAGGGG ATGTAACACC TACTTGGGCA
GACTTGGGGG TAATCTCTTT AAGTAATGGC GGGTCTCCAT ATAGCAGTTT TAAAATGGCA
CTCTCAGCCA ACGGAACACC TTCTATAGCA TGGGCTGACT CCAATAATTA CACATTAAAT
ATTGTGAAAT ACGACAGTGA TGCAAATGAT GGAGTCGGTG CTTGGGATTT ACCTACTGAG
GTCTTTAATT TTGGGGGTTG GAATGGTCAG GCAAAACAAA TTGATCTAAA GTTTAATGGT
GAAACTCCTT ATGTTGTTTT TCTAAAAAAT AGCTGGGAGG GCGCTTTTGT ATATACAACG
ACAGAAGAAG GTAGCTGGGA AATACTAGGC AGCACAATTG AATTAGGCAA TGCTGCATCT
TTGGACTTAG AATTTGACAA CACCGGAACA CCTTATATGA TTTCATCCGA CTGGCAAGGC
GTTGTGGTTG TGAAATACAA CAGCGACACA TCCGCTTGGA ATGAACTCGA TCCGACAAAC
TCGTCGTCAG CCTTAGCGAA CACTAAGGTT GACCTTCAGT TTGATTCAAA CAATAAACCT
TTCTTAGTAG GGCATGATTC GAATGGAGAG ATGGTTTACA TGGAATTTGG ACCTGTACCC
GAATCATCAG ATAATGGCGG TGGCAGTAAT GGTGATGAAG ATAACGGTGA TAACGATAAC
AATGAAGATA ACGGCGGCGG TGCAACTCCT CCACCACCAT CAAACGGCGG CGGAAGCTCA
ACACCAGTTG CTCCGACTTC ACCAGTGACT CCAGCACCAA CAGCTCCTAT CGTTTCAACA
GTAGATGGAA CAACAGTACA AACAACAACT ACGACGCAGA CAAGAACAAC AACTGATGCA
AGTGGAAATA AGACTACAGC GACAGTCTCT GCTGAAAAAT TCACAATTCT ACCGGTAAGT
ACAACACGAA CAGACTCAAC AGGAGGGGCA ACTACTGCAG ATGTTCCACT TTTTTGGGGA
GAGAGTAGTC GTACAGAGTG GGCAACTACG GCTAGTATTC CTGTTGGAAT TGGTTTAAGC
ACGGAAGGTT CACGTGCACC TGCCGAAGTT CAAACTAAAC AAACTGCATT GGCGGATTTA
ATATTTTATA TTGATAATAC GACACCTAAT ACAGATAACG GAAAAAGTAA GATGCTCTCA
GGTGGAACAA CATTCTTAGG TGCATTAAGC AATATTGAAA CATTGGTAGT AAATAAAGTT
ACGTTAACAT CAACAGATAT AGCAGCATCT GTTACGCCTA TTACTATTAC AGGAACTGCA
AATACAATTG TAACAACAGC AGGGGATATT GCACCAGTAG AAGCGTTGGT TATAGATGCA
CATACTTTAC CATTTAACTC AACCCTTCAG CTTCAAAATG TAGAGTTTGC CGTTATTATT
GGAGAAGATT TGACCATTAG AGGCGGTGAA GGTAAAAACA TCCTCTTTAC AGGAGCAGGT
CACCAAAACA TTATGCTTGG AGAAGATGAT GATGAGCTTT ATGCAGGCGA TGGAGATGAT
ACAGTTGGTT CTGCTGGAGG AGACGACCGC ATATTTGGTG AAGCAGGAAA TGACACTATT
TTTGGTGGAG AAGGTAATGA TATGCTTCAT GGAGGAAGCG GCACGGATGT CGCGACATAT
AGCGGCAATA TAGCTGAGTA TATTATCACA AGAGATGAAG GTAAAACTTA TGTAGCTCTT
GCATCAAATC CAAATGAAAT AGACACTATC ATTAACACAG AAACAATTAA GTTTGCAGAT
GGTAATTATA CTATCGAAAA TAGCATAATG TTAAATAAAA TTGCTACTCT ATATACGCAA
ATATTAGGTC GCCAAGCAGA GATAGATGGT TTCCAATACT GGGCAAAAGA TACAATTAGC
TTAGGAAATA TAGCATTAGG GTTTATTGAA TCTGCGGAGT ACAAATCAAG CAGTGGAGTT
AACTGGGAAA CATTGGATGC TTCGGCAAAA GTAGAACAGT TTTATGAGGC ACTTTTAGGT
CGTTCTTCAG ATGAAGGCGG AAAAGCCTAT TGGGTTAATG CAATAAATAC AGGTATGACG
TTTGAGCAAG CAGCAGAAGG TTTTATAGAA TCTATTGAAA TGCAGGGTAT TTATCAGGCT
AAAGAGGATT GGAACTTCTT TGTATAA
 
Protein sequence
MRLDTDNTGW EMIGEQIVNN SSVSPQIEIF GNQVYVAYRN TNTSLTVKTL NLGDVTPTWA 
DLGVISLSNG GSPYSSFKMA LSANGTPSIA WADSNNYTLN IVKYDSDAND GVGAWDLPTE
VFNFGGWNGQ AKQIDLKFNG ETPYVVFLKN SWEGAFVYTT TEEGSWEILG STIELGNAAS
LDLEFDNTGT PYMISSDWQG VVVVKYNSDT SAWNELDPTN SSSALANTKV DLQFDSNNKP
FLVGHDSNGE MVYMEFGPVP ESSDNGGGSN GDEDNGDNDN NEDNGGGATP PPPSNGGGSS
TPVAPTSPVT PAPTAPIVST VDGTTVQTTT TTQTRTTTDA SGNKTTATVS AEKFTILPVS
TTRTDSTGGA TTADVPLFWG ESSRTEWATT ASIPVGIGLS TEGSRAPAEV QTKQTALADL
IFYIDNTTPN TDNGKSKMLS GGTTFLGALS NIETLVVNKV TLTSTDIAAS VTPITITGTA
NTIVTTAGDI APVEALVIDA HTLPFNSTLQ LQNVEFAVII GEDLTIRGGE GKNILFTGAG
HQNIMLGEDD DELYAGDGDD TVGSAGGDDR IFGEAGNDTI FGGEGNDMLH GGSGTDVATY
SGNIAEYIIT RDEGKTYVAL ASNPNEIDTI INTETIKFAD GNYTIENSIM LNKIATLYTQ
ILGRQAEIDG FQYWAKDTIS LGNIALGFIE SAEYKSSSGV NWETLDASAK VEQFYEALLG
RSSDEGGKAY WVNAINTGMT FEQAAEGFIE SIEMQGIYQA KEDWNFFV