| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0171 |
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| Symbol | |
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| ID | 3764612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurimonas denitrificans DSM 1251 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007575 |
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| Strand | - |
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| Start bp | 171145 |
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| End bp | 173376 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_392687 |
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| Protein GI | 78776372 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACCTAA TTATCGTTGA ATCACCTGCA AAAGCAAAGA CAATAAAAAA CTTCCTTGGC
AAGGAATATG AGGTTATTGC ATCAAAGGGA CACATAAGAG ATTTGCCAAA ATCTCGTTTT
GGAATAACAG TAGATGAAAA CTCTCATCTA ATTCCAGCTT ATAGTGTTGC AAAAGAGAAT
GCTGCAACTG TAAAAGAGAT AACCACTTTA GCAAAAAAGA GCGATATCAT CTATATCGCG
ACCGATGAGG ATCGTGAGGG TGAAGCAATC GGATGGCATA TAGCTCATGC TATCAAAAAA
GACCCTGCAG AACTTCCTCG TATAGTTTTT CATGAGATAA CTAAAACAGC CATAGAAAAC
GCACTCTTAA ACGCTAGAAA GATAGATATG GATATGGTAA ACGCTCAACA AGCACGTCGT
ATCCTTGACC GTGTAGTTGG CTATAAACTC TCTCCGCTTC TTAGCTCAAA AATCCAAAAG
GGGCTCTCCG CTGGACGTGT GCAATCATCA ACACTAAAAC TTGTAGTTGA CCGTGAGAGA
GAGATAAGAG CGTTTGTAGC AGAAGAGTAC TGGACTATAG ATACACTCTT TGCAAAAGAT
ATAGAAGCTT CTCTTATATC TCACATGGGA GAGAAGCTCT CAAAACTCTC AATCACAAAC
AAAGCTGATG CATCTTCAAT AGTAAAAAGT GTAAAAGAAG ATAGTTTTAT TATCTCTAAG
ATAGAGACTA AAGAGAGAAG AAGTGCAACT CCACCGCCAT TTATGACATC AACTCTTCAA
CAAGTCGCTT CAAGCAAACT AGGGTTTACT CCTAAGAAAA CTATGATGGT CGCACAAACT
CTTTATGAAG GTGTTAAAAC TCCAAGCGGA ACAAGCGGTG TTATCACCTA CATGAGAACA
GATTCACTAA ACTTAGCACA TGAAGCGCTA ACTGCTGTTC GTGGTCTTAT TGAGAGCAGA
TTTGGCAAAA AATATCTCCC AGCAGAGCCT AAAATTTACA CTAAAAAGGC AAAAGGCGCA
CAAGAAGCTC ACGAAGCTAT TCGCCCTACT ATGCTTGCGT TTACTCCAGA GGTGGCAGCT
TCATTTTTAA AACCAGATGA GATAAAACTA TATCGCCTTA TATATGAGCG CTTTGTCTCT
TGTCAAATGA ATGATGCTGT ATTTGAGCAA CAAAGCATTA TCTTTAGCGG AGCAAATAAC
GAATACAAAG CAATCGGTAG AAAATTAACA TTTGATGGTT TTTACGCTCT CACTGGAGCA
GAAGATAAAG ACAAACTTCT TCCATCTCTA AGTGAAGGGC AAAGTGCTCA AATCCAAAAG
ATAGAGTCAA CTCAGCACTT TACAGAGCCA CCAGCTCGTT ACTCTGAAGC TGCACTTATC
AAAAAACTTG AGAGTGAGGG GATTGGACGA CCTTCTACTT ATGCTCCAAC TATAGCAACT
CTTAGTAACC GCACTTACGT GACTATTGAG AAAAAGCAGA TTATTCCGAC AGAGATGGCA
TTTACAGTTA CCGAGATTTT AGAGAAAAAC TTCTCAAACA TCGTTGATCT CTCCTTTACG
GCAAACATGG AAGAAAAGCT TGATGAGATA GCAGAGGGGC AAAATGATTG GCAAAAACTA
CTTAGTGACT TTTATGGCGA TTTCTTAGCA CAAGTTGAAG AGGGAAAAAC AAATATAGTG
TCTCTAAAGA TGGCAACACC TCTAGGCAGA GCTTGCCCTA AATGTGGAGA AGAGCTACTT
TTACGTTCAG GGAGATTTGG CGAGTTTATA GCATGTAGTG CCTTTCCAAA ATGTAAATAT
ACAGAACAGG TTGAGGGCGA GAAAAAAGAA GGTGAAGAAA ATGCACAATC ATCTTCAAGT
GATGAAATAT GCGATAAATG TGGAAAAGAG ATGGTTACTA AAAACGGGAG AAATGGTCCA
TTTTTAGCAT GTAGCGGTTA CCCTGATTGT AAAAACACAA AAAGCATAAA TGTTGAGGAG
AAGACAAGTG AGACTCCATG TCCTGATTGT GGTGGTAAAA TAAGCCTCAA AAATTCAAGA
CGAGGACCAT TTTGGGGATG TGAAAACTAC CCTACATGTA AGTTTATCTC AAAGTTTGAA
CCATCAAAAT ATAAGTGTAG AGAATCTGGA TGTGATGGTG CACTAGCTTT TAGGGTATTT
AGAGGCAAAG AGATTTATGA GTGCATAAAG TGTAAAGCAA AAACTCCAGC ACAAGAGATA
GTAGCAGAGT AA
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| Protein sequence | MNLIIVESPA KAKTIKNFLG KEYEVIASKG HIRDLPKSRF GITVDENSHL IPAYSVAKEN
AATVKEITTL AKKSDIIYIA TDEDREGEAI GWHIAHAIKK DPAELPRIVF HEITKTAIEN
ALLNARKIDM DMVNAQQARR ILDRVVGYKL SPLLSSKIQK GLSAGRVQSS TLKLVVDRER
EIRAFVAEEY WTIDTLFAKD IEASLISHMG EKLSKLSITN KADASSIVKS VKEDSFIISK
IETKERRSAT PPPFMTSTLQ QVASSKLGFT PKKTMMVAQT LYEGVKTPSG TSGVITYMRT
DSLNLAHEAL TAVRGLIESR FGKKYLPAEP KIYTKKAKGA QEAHEAIRPT MLAFTPEVAA
SFLKPDEIKL YRLIYERFVS CQMNDAVFEQ QSIIFSGANN EYKAIGRKLT FDGFYALTGA
EDKDKLLPSL SEGQSAQIQK IESTQHFTEP PARYSEAALI KKLESEGIGR PSTYAPTIAT
LSNRTYVTIE KKQIIPTEMA FTVTEILEKN FSNIVDLSFT ANMEEKLDEI AEGQNDWQKL
LSDFYGDFLA QVEEGKTNIV SLKMATPLGR ACPKCGEELL LRSGRFGEFI ACSAFPKCKY
TEQVEGEKKE GEENAQSSSS DEICDKCGKE MVTKNGRNGP FLACSGYPDC KNTKSINVEE
KTSETPCPDC GGKISLKNSR RGPFWGCENY PTCKFISKFE PSKYKCRESG CDGALAFRVF
RGKEIYECIK CKAKTPAQEI VAE
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