Gene GBAA_5372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGBAA_5372 
SymbolsigL 
ID2818397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus anthracis str. 'Ames Ancestor' 
KingdomBacteria 
Replicon accessionNC_007530 
Strand
Start bp4865925 
End bp4867232 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content38% 
IMG OID637792044 
ProductRNA polymerase factor sigma-54 
Protein accessionYP_022031 
Protein GI47530682 
COG category[K] Transcription 
COG ID[COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 
TIGRFAM ID[TIGR02395] RNA polymerase sigma-54 factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGCAA GTCTTTTACA AGAACAAAGC TTACGTTTGG CAATGACACA AGAGTTAAGG 
CAAGCGATTA CAATGCTCCA GTATAATGTA CAAGAATTAT CGGAGTTTTT GTATGAGCAA
TCGTTAGAGA ATCCCCTTAT TGAGTTAGGT GGTTTTGAGA GGGAGAAGAA AAAGAGCTCT
AACACAAGTA AAAGTACCAG CAAACAAGTC GAGAATCAGA TGGAAATCTA CAGTGTGGAT
TCAACAACGA TTCAGCAACA TTTATTAAAT CAAATACAGT ATTATAAAAT AGAGGAAGAA
GAGCGAAAAG TAGCTTCTTT CATTATTATG AACATGGATG GAAATGGGTA TTTACAAGAA
ACGAATGAAG AGTTAGCAAA TCTTCTTTCC GCACCACTGC ATGTAGTCGA CCGCTCTGTA
GAGCTTGTCC AATCACTCGA GCCAGCAGGG GTAGGGGCGC GGAATATTAA GGAATGTCTA
ACCTTGCAAT TGAAGCGCTT ACAAAGGCGG AATGGATTGG CAGAAGAGGT TGTAGAAGAT
CATTTCGCTT ATTTCGTGAA GAAAGATTGG AGAAAGCTTG TTCAAGTGTT GAAGTGTAGT
AATGAAGAAT TACAGGATGC AGTAAATTGT ATAACGTCAT TACAACCAAA ACCAGGTCTT
GCGTTTTCTT CTGATAAACC ACTTTATATT GTGCCTGATA TGGCAGTGAA AAAAGATGGC
GATCGTCTCG TTTTACAAAT GAATGAGAGA AATATGCCGA GAATTGAGAT TCATTCTGAA
TATAGTGCGC TTCTTAATAA TAGTGAAAGT GAAGTAGCAT CTTACGTATC AGAAAAGTAT
CAGCATGTGC AGTGGATTAT GCGTAGTTTG AAGCAGAGAA AACAAACCCT TCTGCAAGTG
ATGACCATTA TTATGGAAAA ACAACGTGAT TTCTTCTGGA AAGGTCCGGA TTATTTAAAG
CCACTTGCTT TAAAAGAAGT AGCAGAAGAG CTAAGTGTGC ATGAATCTAC AATTAGTCGT
GCAACGCGAA ATAAATATGT GCAAACACCA CACGGTTTAT TTGAGATGAA ATCGTTCTTT
AGTAATGCCG TTTCGACGAC TGAAGATGAA GCGGTTTCTA CAAAGCGTGT AAAACAATTT
ATTCAAACGC TTGTTGAGGC GGAGAATAAG AAAAAGCCAC TTTCAGACCA AAAGATTTCA
AAATTGTTAG AAGAAGAACA TGAAATTGTT ATTTCTCGAA GAACAGTGGC GAAGTATAGA
GAGCAAATGC ACATCCCGGC GTCGTCATTA CGAAAAACGA TCGGATAG
 
Protein sequence
MKASLLQEQS LRLAMTQELR QAITMLQYNV QELSEFLYEQ SLENPLIELG GFEREKKKSS 
NTSKSTSKQV ENQMEIYSVD STTIQQHLLN QIQYYKIEEE ERKVASFIIM NMDGNGYLQE
TNEELANLLS APLHVVDRSV ELVQSLEPAG VGARNIKECL TLQLKRLQRR NGLAEEVVED
HFAYFVKKDW RKLVQVLKCS NEELQDAVNC ITSLQPKPGL AFSSDKPLYI VPDMAVKKDG
DRLVLQMNER NMPRIEIHSE YSALLNNSES EVASYVSEKY QHVQWIMRSL KQRKQTLLQV
MTIIMEKQRD FFWKGPDYLK PLALKEVAEE LSVHESTISR ATRNKYVQTP HGLFEMKSFF
SNAVSTTEDE AVSTKRVKQF IQTLVEAENK KKPLSDQKIS KLLEEEHEIV ISRRTVAKYR
EQMHIPASSL RKTIG