| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2194 |
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| Symbol | |
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| ID | 3762116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2420568 |
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| End bp | 2421791 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786943 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_392456 |
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| Protein GI | 78486531 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG TTACAGTTAA GATCGAAACG TTATCCCATG ATGGCCGCGG TGTCGGTCGT
TTAAATGGCA AGGCGATTTT CGTTGAAGAG GCCGTGCCGG GCGATGTAGC GGAGATTCGA
ATCACCGGTC GTCAACCAAG CTATGAAGAA GCCAAAATTG TACGTCTAAT CGATTCCTCA
GAAGATCGAG TTGAAGCTTT TTGTCCACAC TATGAAACCT GTGGTGGCTG TCAGTTACAG
CACTTATCCA TTGATGCACA GCGAAAATGG AAAGCCTCTC ACTTCTATAC CGCTTTGTCG
AAAGCCGTTA ATATGAAAGC TTGTCAGATC GAAGCGCCAC TGGTTGGGCA CGATCATGCT
TATCGCCGTC GAGCAAGATT GGTGTTAGGA AAAAATAAAA CCGATAAAGA AGCACGTTTT
GGTTTTCGAG CGAAAGGCTC CAATGAAATT GTCGATATTG AACAATGCCC TTTATTAACA
CCGGCCCTTA ATGAAGCGTT AAACCAAAAA CGTACCGCTG TGTTACCGCA TGCCAGTCGA
GCCCTTAAAG AAATCAGTGT GGTGGACGCA GATAACGGCA TCTTTTGGTC TGATCAAGCT
GTTGATAGCT CAACATGGCC TAGTTATGGT GTAAATGGTT TGACGTTGAA CTTTCCGGCA
CAGGGGTTTG TTCAGGTCAA TGCCGAAATG AATGAACAGA TGGTCAATAA AGCCCTCGAT
TGGTTGGATT TAAATAAAGA ACAACGTGTA TTGGACTTAT TTTGTGGGGT GGGAAATTTT
ACGTTACCGA TCGCTCAGCA GGTAAAAGAA GTCGTTGGCA TTGAAGGCGA AACCGATTTG
GTTCAGATGG CGCAACATAA CGCCAGTCGC GCGCACTGCG AGCAGGCTAC TTTTTATCAA
GCCGATCTGT TTAAAGATGT GACTCCGCAA AATTGGTTTA GAAAACAGAA ATACGATCGA
GTCTTGCTCG ATCCCGGCCG TCAAGGCGCC TATCAGCTTT GCAAAGGGCT GGGGCAATTG
AAAGCCGACA AAATCGTTTA CGTGTCATGC AACGCCTCAA CGTTGATTCG AGATGTCAAA
GAGTTAGAAA AACAGGGGTA TCAGCTGAAA AAAGCGATTA TGGTGGACAT GTTCCCACAT
ACCTCGCATA CGGAAGTGAT GGCTCAGTTA ATCAAAACCG GTAAAAAGCC TAAGCAACGA
GGCCCGGGTA TTTTCAAATT ATAA
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| Protein sequence | MKTVTVKIET LSHDGRGVGR LNGKAIFVEE AVPGDVAEIR ITGRQPSYEE AKIVRLIDSS
EDRVEAFCPH YETCGGCQLQ HLSIDAQRKW KASHFYTALS KAVNMKACQI EAPLVGHDHA
YRRRARLVLG KNKTDKEARF GFRAKGSNEI VDIEQCPLLT PALNEALNQK RTAVLPHASR
ALKEISVVDA DNGIFWSDQA VDSSTWPSYG VNGLTLNFPA QGFVQVNAEM NEQMVNKALD
WLDLNKEQRV LDLFCGVGNF TLPIAQQVKE VVGIEGETDL VQMAQHNASR AHCEQATFYQ
ADLFKDVTPQ NWFRKQKYDR VLLDPGRQGA YQLCKGLGQL KADKIVYVSC NASTLIRDVK
ELEKQGYQLK KAIMVDMFPH TSHTEVMAQL IKTGKKPKQR GPGIFKL
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