Gene Tcr_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2193 
Symbol 
ID3762115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2419539 
End bp2420510 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content45% 
IMG OID637786942 
Productcation diffusion facilitator family transporter 
Protein accessionYP_392455 
Protein GI78486530 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3965] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGG TTAGAGTTCC TTTGGAACAA AAAATTGCGA CGGAAAAGCG CGCGATCAAA 
CTGGTAATGT TCGGTGATGT CATTATGGCC GTGCTCGGTT TGGTGTTCTT TTATTTGACC
AACTCTCAAG CCATCTTGAT GGATGGGGTT TACCCTTTTA TTGATTTGGT GGCCGGGTTG
TTGACGTTGC GAGTGGTGGG GTTGATGGCA AAACAAGCCA GTCAGTCTCA ACCGTTTGGG
TACGCCATCT TTGAACCGGT TTTGAACTTT ATCAAAGGCA TTTTAATTCT GTTGGTCATT
CTGGTGGCTT TTTATGCCTC GGTTGAGGCC ATTTTGCATG GCGGTCGCCA CATTGATGCC
AATATTGCGG TTTTCTATTC CATCATCGCC TCCATTCTCG GATTTGGATT AGCGGCGATT
TTGTATCGTA TGAATAAAAC GGCGGAATCG TCTTTGATCG ATGTTGATTT ACAAGGTTGG
CTGGTCGGGG GCATTCTCAG TATTGCCGTT GGACTGTCTT TTGCGGTCGC GATCTGGATG
GAGTCAATTG GTCATAGTGA ATGGGTGCCT TATACGGATC CGATCGTAAT TCTGGTATTG
ATTATGATGA TGTTACCGAT GCCGCTGAAG ATTTTGAAAG ACAATGGGCT TCAAATTATT
GGGCGAACCG ACAACAATGA TCATATGTCG TTGCTGCAAA AAGAAGTGGA AACCGTTTTT
GCCACCGTAC CGTATCTGGA TATGAAAATT CGTTATTTAC AGGCCGGACG TATGATTTAC
GTGCAAGTGT ATATTCAAAT GGAATCCGAT ATTCCGTTTG ATCTAAACCA ACAGGATGCG
TTACGTGATC GGTTGTTCCA ACATTTGAAG CAGACCTATG ATTATTTATC ATTGGATGTC
ATCTATACGG CACAACCGAT CTGGGTGGCG CGTAGCGTTG GGGAGGATAC GGTGCAATCA
GCCTCGTCTT AA
 
Protein sequence
MAEVRVPLEQ KIATEKRAIK LVMFGDVIMA VLGLVFFYLT NSQAILMDGV YPFIDLVAGL 
LTLRVVGLMA KQASQSQPFG YAIFEPVLNF IKGILILLVI LVAFYASVEA ILHGGRHIDA
NIAVFYSIIA SILGFGLAAI LYRMNKTAES SLIDVDLQGW LVGGILSIAV GLSFAVAIWM
ESIGHSEWVP YTDPIVILVL IMMMLPMPLK ILKDNGLQII GRTDNNDHMS LLQKEVETVF
ATVPYLDMKI RYLQAGRMIY VQVYIQMESD IPFDLNQQDA LRDRLFQHLK QTYDYLSLDV
IYTAQPIWVA RSVGEDTVQS ASS