Gene Tcr_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2181 
Symbol 
ID3761872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2404738 
End bp2405895 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content49% 
IMG OID637786930 
ProductNnrS 
Protein accessionYP_392443 
Protein GI78486518 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3213] Uncharacterized protein involved in response to NO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCTTTT TTGATCGTGC TTTTCGTTCG TTCTTCCTCG GCGGAAGCCT TTTTGCGGCA 
GTGGCCATGT TTGTTTGGTG GTTGAATTAT CCGCAGTCTT CATCTTCTTT TTCCGACGTT
TCGCTGATGT TGTGGCACGC GCATGAAATG GTGTTTGGTT ACGCTTTGGC AACGGTGACC
GGGTTTTTAT TGACCGCCGT GATGAATTGG ACGCGGTCGG ACTCGGCATC CGGTGTGCCG
TTGATGGGGT TGTTTTTGTT GTGGTTGAGT GCGCGCATCG GGTTTCTTTG GGGAGCGCCA
TTGGAAACGA TCATGGCACT GGATATGCTG TTTAACTTAG GCTTGTTTTT GCATTTTGCG
TGGCCGGTTT ACCGCCGAAA ATTATGGGCT CAAACGGGTT TGTCGGTTAA GTTTTTATTG
TTAATCTTCG CTAATGGCGT TTTTTATATC GGGGCCTTAG GTTGGTTAGA CAACGCCGAT
TTATGGGGCG TAGTGCTGGG GCTGTTTTTA GTGTTGGCGA TTAATCTCAC TATGATACGC
CGTTTAGTTC CCTTTTTTAC GGAAAAGGCA TTGGGGTTGG TGGAACGCCC AAACAGTGAT
CTACTGGATA AATTGGCGTT GACCGGGTTT CTGGCATTGA TGGTTGCGGC CACATTTTTC
CCGACACACT GGCTTACCAC GGTGATTGCA TGGCCTCTGG CTGCAGTGCA TATACTTCGA
TTTAAGGTTT GGTACCATCC AAAAGTGTGG TCGGTTGTGT TGCTGTGGCC GTTGCACTTT
TCGTATGGGT TTATGATTTT TGGCATGCTG CTTTATGGGT TTGCAGGCTT GAACTGGGTG
GCACCTTCTC TTGCTTTGCA TGCGCTTGCA GCAGGTGGTA TTGGGTTATT ATGCTCTTCG
ATAATGGCGC GTATTTCGTT AGGCCATACT AATCGTAACG TGTTTGATCC GCCTAAAGCG
GTGGTGTGGG TTTTTGGTAT TTTAGCTGCG GCGGCCTTTG TGCGAGTGGT GTTGCCAATA
CTGGATGCCG GGCATTACGT GTTGTGGATG CATCTCAGCC AGTTGGGCTG GGTGATCGCT
TTTGGGTTGT TGACGATTTT ATACGCCCCG ATTCTGGCAC GCCCGAGCCC TGAAAAAGAC
ACCGGTATTC GATTGTAA
 
Protein sequence
MFFFDRAFRS FFLGGSLFAA VAMFVWWLNY PQSSSSFSDV SLMLWHAHEM VFGYALATVT 
GFLLTAVMNW TRSDSASGVP LMGLFLLWLS ARIGFLWGAP LETIMALDML FNLGLFLHFA
WPVYRRKLWA QTGLSVKFLL LIFANGVFYI GALGWLDNAD LWGVVLGLFL VLAINLTMIR
RLVPFFTEKA LGLVERPNSD LLDKLALTGF LALMVAATFF PTHWLTTVIA WPLAAVHILR
FKVWYHPKVW SVVLLWPLHF SYGFMIFGML LYGFAGLNWV APSLALHALA AGGIGLLCSS
IMARISLGHT NRNVFDPPKA VVWVFGILAA AAFVRVVLPI LDAGHYVLWM HLSQLGWVIA
FGLLTILYAP ILARPSPEKD TGIRL