Gene Tcr_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2164 
Symbol 
ID3761329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2386841 
End bp2387275 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content45% 
IMG OID637786913 
ProductATP synthase F1, epsilon subunit 
Protein accessionYP_392426 
Protein GI78486501 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTCT CAATGCAAGT CGATATTGTA AGTGCTGAAG GATCTTTGTT CTCTGGTAAA 
GCGGATATGG TCTTTGCACA GGCTGCCGAT GGTGAAGTCG GCATCCTGCC AAAACATACC
CAGTTGTTAA CGCAGTTAAA GCCTGGTCAA GTGCGTGTTG TCAGTGGTGA TGAAGAAGAT
AGTTTCTTTA TCAACAGTGG TGTCCTAGAA GTTCAACCAA GTGTTGTAAC AATTCTAGCT
GACACGGCAA TTCGTGCTGA AGATCTTGAT CAAGCTGCGG CTGAAGAAGC AAAACGTCGT
GCTGAAGATG CGATGGAGCA AGCAAAATCT GATACAGATA TTGCGCGTGC TCAAATCGAA
TTGGCAGAAG CCGTTGCGCA AATTCAGACG ATTACTAAGT TACGTGATCG TTTACACAAG
ACAGGATTGT CTTAA
 
Protein sequence
MAVSMQVDIV SAEGSLFSGK ADMVFAQAAD GEVGILPKHT QLLTQLKPGQ VRVVSGDEED 
SFFINSGVLE VQPSVVTILA DTAIRAEDLD QAAAEEAKRR AEDAMEQAKS DTDIARAQIE
LAEAVAQIQT ITKLRDRLHK TGLS