Gene Tcr_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2159 
Symbol 
ID3761324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2381415 
End bp2382731 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content44% 
IMG OID637786908 
Productphosphate-selective porin O and P 
Protein accessionYP_392421 
Protein GI78486496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC AATTTTTAAT CAAATTACTT CCCGCTGCAA TCATTGCAGC CAGCATGGCA 
ACGCCTGCAC AAGCCGCCAA CTGGTTAATG CTACAAGGAA CTGAAGCAGA CCACCAAGCA
CCTAGAGCAA AAGTGTGGGG CTTCATACAA GCCGAATATC AACAAACGGA CGACACCAAA
CTGACTGCAG GACCAGCCAG TGGGCAAAGT GCGGCCTTTA ACTTGGTTAA ACCTCAGAAT
ACTTCTGCCA ACAGCTTTAA CATTCGCCGA GCAAGAATTG GGGTTCGTGG TGCCAACTTA
CCACTCGACA ATAAGGTGAA TTATTTCTTA CTGGCTGAGT TCGGGAACAA TGGTATTACC
ACAGGGCAAA ACGCTTCGAA AGGTCAATTA ACCGATGCCA GTATTACCTT AAATCATATT
CCTGGCGCTC GTATTCGTGT AGGTCAGTTT AAAACACCCG GTTCTGAAGA AGGGTTTCAG
GGCATCGCGG TCTTTAACTA CATTAACTTT ACCAATATGA CAGACCGTTT ATTATTGGAA
CGGCATTTTG ATACATCAAC CACTTCTACA GGGCGTAATG GACCCGTTGG CGCATTTCGT
GACCAAGGGA TTGAAGTGTT TGATTCATTC AAACACAACG GCTGGGACAC CAGTTATGCG
GTCATGATTG GTAACGGTAA TGGACTTGGA CGCATTGACA ATAATGACGC CAAAGATACT
TATTTATATC TTTCGACTGA AATGGATATT CCAGGTGGTA AAAAAGGCCG TAAAAATGGT
CTGAAATTCT ATGTCTGGAA CCAGGATGGT AAGCGCACTA TTGATGGCGT TGAGAAAAAC
CGTACGCGTT CTGGTTTAGG GACCACTTTC TTGAACAGTA AATACCGTTT CGCTGCGGAA
TATGTGCAAG CCGATGGCAT GATCTTTGGT GGAACCAAAG GCGCTGGTGC ACCTGGGGGT
GAATATAACA ATGGAAATCC TGTTACCTTT AACGTCTTTA CAGATCAAAA AGCCAACGGT
TACTACTTAG ATTTTGGCTA CCGCATCATT CCAAATTTGG AACTTAACGT ACGTTATGAC
GCTTTAGACA GTGCGACTGA AACCGATGCT GCAACCGGAA CCGGTCAGGA TAAATATCGT
GAGTTCAGAA CCACAACACT GGGTGCTCAA TATTTCGTCA ATAAAAAGAC CGTGCTAAGA
GCGAACTATG AAATTCGTGA TATCAAGGCA CCTAAAGCAG CAGCAGGCGC ACCGGTACAT
GATATTTTAA AAAGTGTCGA CAACCGCATC GCCTTACAAC TGTCTATTCT TTACTAA
 
Protein sequence
MKKQFLIKLL PAAIIAASMA TPAQAANWLM LQGTEADHQA PRAKVWGFIQ AEYQQTDDTK 
LTAGPASGQS AAFNLVKPQN TSANSFNIRR ARIGVRGANL PLDNKVNYFL LAEFGNNGIT
TGQNASKGQL TDASITLNHI PGARIRVGQF KTPGSEEGFQ GIAVFNYINF TNMTDRLLLE
RHFDTSTTST GRNGPVGAFR DQGIEVFDSF KHNGWDTSYA VMIGNGNGLG RIDNNDAKDT
YLYLSTEMDI PGGKKGRKNG LKFYVWNQDG KRTIDGVEKN RTRSGLGTTF LNSKYRFAAE
YVQADGMIFG GTKGAGAPGG EYNNGNPVTF NVFTDQKANG YYLDFGYRII PNLELNVRYD
ALDSATETDA ATGTGQDKYR EFRTTTLGAQ YFVNKKTVLR ANYEIRDIKA PKAAAGAPVH
DILKSVDNRI ALQLSILY