Gene Tcr_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2157 
Symbol 
ID3761322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2380386 
End bp2380844 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content41% 
IMG OID637786906 
Producthypothetical protein 
Protein accessionYP_392419 
Protein GI78486494 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATA AAAAAACTAC CTTACTTTTT TTGAGCTGGA TGATGTCGAT GCTCATTTCC 
TTAAATGTAC TTGCGATGCA AGAACCCCCG TTGCCGGAAA CGTTTGCGGA ACACAAAGTC
GTCTTACAGA TCAGTGATCC AAACCCATTC AAGCAAACAT TGGTTTTAAA TGTGGCTGGA
AATCTGATCA AACATTACGG TGCTTCAAAT ATTGATTTGG AAATCGTCGC ATTCGGACCT
GGCTTGCGCT TAATGATGGA TGGAAACACC AACCAACAGC GTATTAAATC CTTGATGAGC
ATTGGTGTTC GATTCAGCGG TTGCGCTAAC ACGCTTAACA ATTTTTCAAA AATTCTCGGA
AGCAAGCCTG AATTAATTGA TGGCGTAACC ATTGTTCCAG CTGGCGCAGC ACGTATTTTA
CAGCTCAATG CGGCAGGCTA CCAAATCTTA AAACCATAA
 
Protein sequence
MINKKTTLLF LSWMMSMLIS LNVLAMQEPP LPETFAEHKV VLQISDPNPF KQTLVLNVAG 
NLIKHYGASN IDLEIVAFGP GLRLMMDGNT NQQRIKSLMS IGVRFSGCAN TLNNFSKILG
SKPELIDGVT IVPAGAARIL QLNAAGYQIL KP