Gene Tcr_2151 details

Gene Information

• Locus tag: Tcr_2151
• ID: 3761316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 2373894
• End bp: 2375729
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637786900
• Product: ammonium transporter
• Protein accession: YP_392413
• Protein GI: 78486488
• COG category: [P] Inorganic ion transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG0004] Ammonia permease; [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain; [TIGR00836] ammonium transporter

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAC AGTTAATTGA TATTCTGTGG GTTTTAATCA GTGCGGTTTT GGTAGCTCTT 
ATGCAACCAG GGTTCACTGC GCTTGAAGCA GGGGCCACGC GAACAAAAAA TTCCATTTCA 
ACCGCCATCA AAAACGTCAG TGATTTTTTA ATCGCCTTTA TGATTTTTGT CGTAGTCGGC 
GCCAGCATCA TGCTCGGCAC AAGCCATCAT GGGCTATTTG GCTGGAGCCC CATCTTTTTT 
TATGAAACCT CACTTTCTGA ACTGGTGCTC ACGTTATTTC ATGCCATGTT TGTCTCGACC 
GCCGTTACCA TTATTTCAGG TTCCATTGCA GAACGCACTA AATACACGTC CTATTTAATC 
ATTGCTGTGA TTGTTTCCTT ATTCATTTAC CCTGTCCAAG CGCACTGGAT CTGGAATGCC 
GATGGCTGGC TTGCACAACT CGGCTTCATT GACTTTGCCG GTTCCACCGT CGTGCACTCT 
GTCGGTGGCT GGGCCGCACT GGCAGCTATT TTGATCATCG GTCCTCGCCT AGGGCGGTTT 
GAAACAAAAG AAAGCCCATT CGAGCAAGCA AATTTAGCTT ACAGTGCATT GGGCGTATTC 
CTTATCTGGC TCGGCTGGAT TGGCTTTAAT GGGGGAAGCG TACTGGCACT CAACTTCGAA 
ACAGGCAAAG TAGTCCTAAA CACTCTCATT GCAGGGGCGA TTGGCGGAAT TACCGGCTTG 
ATTATCAGCC GACTTTACAC TGGCTACTAT CAAGTCATCG ACATCATTAA TGGTATCTTG 
GCCGGTTTGG TGGCCATTAC CGCTTCGGCC CATCTTGCCT CTCCCGATGC TGCCATTCTG 
GTAGGAATGT TAGGGTATCT TGCCTATTTG GCTGGCAAAA TATTACTGGT TAAATGGAAA 
ATCGATGATG CCCTCGAAGC CGTACCCGTT CATCTATTTG CTGGCGTTGC AGGGACACTG 
CTCGTGGCTT TTTTAGCTGA TGACGTTGGC TTTTGGCAAC AGTTAAAAAT TCAACTACTC 
GGCATCATTG TCGTTGGATT GCTGACCTTT TTGGTGAGTT ACACTCTTTT AAGCATCATT 
AACCGTTTTT ATCCATTAAG AGTGAGCGAA TCGAAAGAAA TACTGGGACT CAATATCAGC 
GAACACCAAG CGTCAACGTC GATGTTTGAT CTGGCACAAG CCATGAACAA TCAGGCGCAG 
CAACAAGATT TTTCTAAAAA AATCATGGTG GAACCCTATT CCGATGCGTC CTTAATCGCG 
ACCTATTACA ACCATGTCAC CCAAGCATTC AATCAACTCA ATGATGAAAA AGAAGCATTG 
ATTGAAGAGA GCTATCAAAT GGCCAATTAT GACCAGTTAA CAGGGCTGGC CAAAAGGCGA 
CTGCTGGTCA ATGAGCTGGG GCGCTCCATT GCAAGACTAG ATCGACACAC ACAATCGAAT 
GCCATCTTGT TTATCGACTT AGACGGTTTT AAATCCATTA ATGACCGATA TGGTCATAAT 
GCCGGAGACG CTTTACTGAA AGAATCGGCC GCTCGCATCC AAAAAATCAT CCGAAAGACC 
GACCTGGCGG CGCGATTTGG TGGCGATGAA TTTGTGGTGT TATTGGAAGA CATTCAAAAT 
GAAAGTTTTG CGGCTCAAGT TGCTGACAAA ATAATCGCTG CGTTGCGATC TCCTATCTTG 
CTTTCTAACA ATTCTGAAGG GCAGATAAGC GCTTCCATCG GCCTTAAAAT ATTTAGTCAA 
TCTGGCAAAC AGCATGTCGA TGACATTCTC AACCAAGCCG ACAAAGCCAT GTATGAAGCG 
AAACGACGTG GCAAAGGACA ATGGGTATTA GCCTAA 

 

Protein sequence

MSEQLIDILW VLISAVLVAL MQPGFTALEA GATRTKNSIS TAIKNVSDFL IAFMIFVVVG 
ASIMLGTSHH GLFGWSPIFF YETSLSELVL TLFHAMFVST AVTIISGSIA ERTKYTSYLI 
IAVIVSLFIY PVQAHWIWNA DGWLAQLGFI DFAGSTVVHS VGGWAALAAI LIIGPRLGRF 
ETKESPFEQA NLAYSALGVF LIWLGWIGFN GGSVLALNFE TGKVVLNTLI AGAIGGITGL 
IISRLYTGYY QVIDIINGIL AGLVAITASA HLASPDAAIL VGMLGYLAYL AGKILLVKWK 
IDDALEAVPV HLFAGVAGTL LVAFLADDVG FWQQLKIQLL GIIVVGLLTF LVSYTLLSII 
NRFYPLRVSE SKEILGLNIS EHQASTSMFD LAQAMNNQAQ QQDFSKKIMV EPYSDASLIA 
TYYNHVTQAF NQLNDEKEAL IEESYQMANY DQLTGLAKRR LLVNELGRSI ARLDRHTQSN 
AILFIDLDGF KSINDRYGHN AGDALLKESA ARIQKIIRKT DLAARFGGDE FVVLLEDIQN 
ESFAAQVADK IIAALRSPIL LSNNSEGQIS ASIGLKIFSQ SGKQHVDDIL NQADKAMYEA 
KRRGKGQWVL A