Gene Tcr_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2148 
Symbol 
ID3761313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2371358 
End bp2372149 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID637786897 
ProductABC transporter related 
Protein accessionYP_392410 
Protein GI78486485 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TTCAAAACTC ACCGCTGATT GTAAACCAGC TGAGCATGCG GTATCACCAT 
AAGCCGGTTC TGACTGATGT CAGTTTTCAG ATTCCGGAAG GAAAAACGAT CGCAGTGGTA
GGGCCGAATG GGGCTGGAAA GTCTACCTTG TTAAAAGGGA TTATGGGACT TGAGCCGACA
ATGAGCGGTG AGGTTCAATT TTTTGGGCAG CCGCTCGATC AGAAGCGCTT AGCGGTTGCT
TATGTGCCAC AAAGAGAAGA ATCTGATTGG GATTTTCCCA TTAACGTGAT GGACGTTGTG
TTGATGGGGC GACATGGCCA GCTCAAATTT TGGCAACGAC CGTCTGCACA AGATGTGCTG
ATTGCCGAGC AAGCGTTAGA ACAAGTGAGT ATGTTGGACT TTAAAGATCG TCAAATCAAT
CAACTTTCTG GTGGGCAGCA ACAACGTGTT TTCTTAGCAA GAGCATTAGC GCAAAAAGCG
AGTCTTTATT TAATGGATGA GCCATTTGCC GGCGTCGATG TGACGACGGA AAAGGCCATC
ATTGAATTGT TTCGAACATT AAAATCTGAA AATAAAACCA TCGTGTGTGT GCACCATGAT
TTGAATACGG TGGGGGAATA CTTTGATTGG GTCATACTGG TTAACGCACG CCTGATTGCA
GCGGGCCCAG CCGATGAGGT GTTAACACCG GAGAATTTGA ATAAAACCTA CGGCGGACGG
TTATCGTTAC TTAATGAAAT GACGGAAAAG CTCTACCGTT CGAATATTGA TCGAGTGCAC
GATGATGGAT GA
 
Protein sequence
MKTIQNSPLI VNQLSMRYHH KPVLTDVSFQ IPEGKTIAVV GPNGAGKSTL LKGIMGLEPT 
MSGEVQFFGQ PLDQKRLAVA YVPQREESDW DFPINVMDVV LMGRHGQLKF WQRPSAQDVL
IAEQALEQVS MLDFKDRQIN QLSGGQQQRV FLARALAQKA SLYLMDEPFA GVDVTTEKAI
IELFRTLKSE NKTIVCVHHD LNTVGEYFDW VILVNARLIA AGPADEVLTP ENLNKTYGGR
LSLLNEMTEK LYRSNIDRVH DDG