Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2137 |
Symbol | |
ID | 3761302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2358616 |
End bp | 2359140 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637786886 |
Product | shikimate kinase |
Protein accession | YP_392399 |
Protein GI | 78486474 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.628527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATAGAG AAAGTATTTT TTTAGTAGGA CCCATGGGTG CTGGTAAGTC CACTGTCGGC CGTTTTTTAG CTGATAAACT GCATTATCAG TTTTTAGACA GCGATCAAGT GATAGAAGAC AAAACCGGCG CGACGATTCC AATGATTTTC GATATTGAAG GAGAGTCAGG GTTTCGTGCG CGCGAAAAGG CCGCGATTGA TGACTTAACG CAGCAATCAG AAATTGTGCT TGCCACAGGT GGGGGCGCTA TATTAAACCC TGAAAATCGT AAAAATCTGC GTTCAAGAGG GTTTGTGGTT TATTTAAAAT CCTCAGTAGA TTCTTTGGTT CAACGAACCC GGCATGATCG TAATCGTCCG TTGTTACAAA CAGAAAATCC AGAGCAGGTT TTAAGAAAGC TCATTGAAGA GCGTGGCCCT TTGTATGAGG AAGTGGCCGA TTTGGTGATT CAAACCGAGC AGGTTTCCGT GCATCGTGTG GTTAAGCAGA TTCTGGATAA GTTGGCAGAG CAAAAAATCA TTTAA
|
Protein sequence | MHRESIFLVG PMGAGKSTVG RFLADKLHYQ FLDSDQVIED KTGATIPMIF DIEGESGFRA REKAAIDDLT QQSEIVLATG GGAILNPENR KNLRSRGFVV YLKSSVDSLV QRTRHDRNRP LLQTENPEQV LRKLIEERGP LYEEVADLVI QTEQVSVHRV VKQILDKLAE QKII
|
| |