Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2136 |
Symbol | |
ID | 3761301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2357529 |
End bp | 2358605 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786885 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_392398 |
Protein GI | 78486473 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.122395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGACAC TAACAGTTGA ATTGGGGGAA AGAAGTTACC CTATTTTTAT TGGACAGGGT TTGTTAGGGC AAGCCGAACT GTTTAAACCT TATGTGACCG GAACGCAGGT TCTTATTGTG TCGAATACCA CGGTTGCGCC GTTGTATTTG GAGAAAGCAA AACAGGCCTT TTCAGGATAT GACGTTAAAA CTGTTATTTT GCCGGACGGG GAACAATATA AAAATCTTGA TGTCTTGAAT CAGATTTTTG ATGTGGCGAT TGAAAACCGT TTTGACCGAA AATGCACTTT TGTGGCATTA GGCGGTGGGG TTATCGGTGA TATGACTGGA TTTGCGGCCG CCTCTTATCA ACGAGGGGTG AATTTTATTC AGATCCCGAC CACCTTGCTG TCACAAGTCG ACTCTTCTGT CGGCGGTAAG ACCGGCGTAA ATCACCCGAA AGGGAAAAAC ATGATAGGCG CTTTCCATCA GCCGGAATGC GTTGTCATTG ATACGGATAC CTTGAATACC TTGGAAGACC GAGAGTTATC TGCTGGGCTT GCCGAGGTTA TTAAATATGG TTTGATCGTC GATTATCCAT TTTTTGAGTG GTTGGAACAA AATCTACCAG GCCTGCTGGC AAGAGATCCA GTGGTTTTAG CTGAAGCGAT CGAACGTTCT TGCCAGAATA AAGCGACCAT TGTGGCAAAA GATGAAAAAG AAGCCGGTCT GCGTGCGTTA TTTAATCTGG GTCACACCTT TGGTCATGCC ATTGAAGCCG GAATGGGTTA CGGTAATTGG TTGCATGGTG AAGGGGTCAG TGCCGGCATG ATGCAAGCAG TTTATCTGTC AAAGTTAATG GGAGATTTAA CGCAAACAGA CCAGAAACGA ATTGCTGCCA TTTTGCAATC GGCTCATTTG CCGGTTATGC CGCCTAAAGA AATGAGTGTT CAACAATTTC TAGATTTAAT GGCCGGTGAT AAAAAAGTAC AGGCGGGTCA AATTCGTTTG GTTTTGTTGA AAGCGATTGG GCAAGCTTAT GTAACCGGAG ATTACCCAGC CGAATTATTG GAACGCACCT TGATTGAGTA TCGTTAA
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Protein sequence | MKTLTVELGE RSYPIFIGQG LLGQAELFKP YVTGTQVLIV SNTTVAPLYL EKAKQAFSGY DVKTVILPDG EQYKNLDVLN QIFDVAIENR FDRKCTFVAL GGGVIGDMTG FAAASYQRGV NFIQIPTTLL SQVDSSVGGK TGVNHPKGKN MIGAFHQPEC VVIDTDTLNT LEDRELSAGL AEVIKYGLIV DYPFFEWLEQ NLPGLLARDP VVLAEAIERS CQNKATIVAK DEKEAGLRAL FNLGHTFGHA IEAGMGYGNW LHGEGVSAGM MQAVYLSKLM GDLTQTDQKR IAAILQSAHL PVMPPKEMSV QQFLDLMAGD KKVQAGQIRL VLLKAIGQAY VTGDYPAELL ERTLIEYR
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