| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2130 |
|---|
| Symbol | |
|---|
| ID | 3761915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2351040 |
|---|
| End bp | 2351738 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637786879 |
|---|
| Product | adenosylhomocysteine nucleosidase |
|---|
| Protein accession | YP_392392 |
|---|
| Protein GI | 78486467 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.343593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTG CCATCATTGG TGCCATGGAA GAAGAAGTTG CCTTATTGCG TAACCAGATC
CAAAATTTGA AAACAGAAAT TCACGGTGGC TTTGAATACT ACCTGGGACA GATTAATGCC
ATTGACGTCA TTCTATTACG CTCTGGCATC GGAAAGGTGA ATGCTGCAAT TGGAACAGCG
TTGCTCATTA AGTTGTACGA ACCGGATTAT GTCATCAATA CTGGTTCAGC AGGGGGCTTC
CATACCGACT TAGAGGTGGG GGATATCGTC ATCAGCCAAT CGGTTTGCCA TCATGATGTT
GATGTCACCC CGTTTGGATA TGCTCGAGGC CAGGTTCCAG GGCACCCCGA ATGCTATCTT
GCGGATATCC ACTTGATTGA CATTGCAAAG CGTAGCATTG ATGCCTTACA GGAAGTCACG
CATATGCATG GCTTGATTGC CACGGGAGAT CGATTTATGC ATCTTCCTGA AGATGTCGCT
ACCACGCGAG AGTATTTTCC GGACATGATT GCTTGCGAGA TGGAAGCGGC GGCCGTTGCA
CAAACCTGCC ATGCGTTTGA AACGCCTTTT GTGATCATTC GTTCTTTATC GGATATTGCA
GGCAAAGAAA ACGCCGTGAC GTTTGAACAG TATTTGGATA AAGCCGCCAC TCACTCGGCA
CGCCTTATTC TCGAAATGTT AACCCACTTA AAGTCTTAA
|
|---|
| Protein sequence | MKVAIIGAME EEVALLRNQI QNLKTEIHGG FEYYLGQINA IDVILLRSGI GKVNAAIGTA
LLIKLYEPDY VINTGSAGGF HTDLEVGDIV ISQSVCHHDV DVTPFGYARG QVPGHPECYL
ADIHLIDIAK RSIDALQEVT HMHGLIATGD RFMHLPEDVA TTREYFPDMI ACEMEAAAVA
QTCHAFETPF VIIRSLSDIA GKENAVTFEQ YLDKAATHSA RLILEMLTHL KS
|
|---|
| |