Gene Tcr_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2121 
Symbol 
ID3761904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2343434 
End bp2344735 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content41% 
IMG OID637786869 
ProductPhage integrase 
Protein accessionYP_392384 
Protein GI78486459 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCACA TTAGAGTTCG CAGGGAAACT AATACTTTAT ATTTTGATTT TTCATATCTG 
AAGCTTCGAT GTCGAGAGCA AACGACTTTA CATGATACGA AGATCAACCG TAAAAAGCTG
GAAACTATTC TAGAGCGTAT TAACGCAGAG ATAACCTTAG GAACGTTTGA ATACGGTAAA
TATTTTCCTA ATAGTTCGAT GCTGGCAAAA ATTGAAAAAG CGACCGCCAA ACTCGTCCCT
GGTTATACCA AAACACCATT GTTTAAAGAT TTTGTTGAGG AGTGGTTTTC AGAAATGGAA
CCAACATGGC GAAAAGCCAC TGCGGATGGT TATCGAAGTT ATCTCGATAA GCGTTTAATT
CCTCATTTTG GAGAAATGGA AGTCAGCAGT ATCACCAAAG CAGAGATATT AAAGTACCGA
GCACACGTCG CCAAACAGTC CGCCGGTAAG TTAAAGTCTA AGACGATTAA TAAATTTATT
AAGTGTCTAA ATATGGTTAT GAATGAAGCC GCTGACCGAT ATGATTTTAC GCCACCACAT
CTCAATATCA AGCCTTTGAA AGAAGAAAAG GTACATATCG ATCCTTTTTC TATTGAAGAG
GTTAATCAGA TTCTTGCACA AGTGCGATCT GATTGGCGAG ACTATTTATT AGTTCGTTTC
TTTACTGGGA TGCGTACTGG AGAGATTGAC GGTCTTAAGT GGGAGCACGT TGATTTTTCT
CGTCGAGAAA TTCTTATTCG CGAGACTTAT TCTGCAGGTC GATGGGAGTA CACCAAAAAT
GATGGGTCTC AACGAGAAAT CGAGATGTCC ACATTAGTCT ATAACACCTT ATCAAAACGG
TTTAAAGAAC GAGACCCAAA ATCTGAGTTG GTGTTTTGTA CTGGAAATGG TGCGCCTGTT
CATACACCTA ACTTCTTAAG AAGGGTTTGG AGGCCATTAC TTTCTTATCT TAAGCTCAAG
TACCGTAAAC CTTATCAAAC GCGCCACACT GCCGCTACGA TTTGGTTAGC GGCAGGGGAA
AATCCAAACT GGATTGCCAA ACAAATGGGA CATTCAACTA CTTCGATGCT TTTTACTGTC
TACGCTCGTT ACGTTCCCAA CCTAACCCGT AAGGATGGTT CAGCGATGGA ACGTTTGTTG
GCGTCGAACA TTGATGGTTT TCATGTAGCG GCTAATAAAG AGGAAAGCGT TGATGAAGAT
AAGCCAGAAA GTTCTGAGGT ACTTGAACAA CAAAACGAAA TGGCATTCTG GGATCGGATC
TTGCAGAACA CACAAGACTA TCGTTCAGGA GGTGGTCAAT GA
 
Protein sequence
MGHIRVRRET NTLYFDFSYL KLRCREQTTL HDTKINRKKL ETILERINAE ITLGTFEYGK 
YFPNSSMLAK IEKATAKLVP GYTKTPLFKD FVEEWFSEME PTWRKATADG YRSYLDKRLI
PHFGEMEVSS ITKAEILKYR AHVAKQSAGK LKSKTINKFI KCLNMVMNEA ADRYDFTPPH
LNIKPLKEEK VHIDPFSIEE VNQILAQVRS DWRDYLLVRF FTGMRTGEID GLKWEHVDFS
RREILIRETY SAGRWEYTKN DGSQREIEMS TLVYNTLSKR FKERDPKSEL VFCTGNGAPV
HTPNFLRRVW RPLLSYLKLK YRKPYQTRHT AATIWLAAGE NPNWIAKQMG HSTTSMLFTV
YARYVPNLTR KDGSAMERLL ASNIDGFHVA ANKEESVDED KPESSEVLEQ QNEMAFWDRI
LQNTQDYRSG GGQ