Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2121 |
Symbol | |
ID | 3761904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2343434 |
End bp | 2344735 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637786869 |
Product | Phage integrase |
Protein accession | YP_392384 |
Protein GI | 78486459 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCACA TTAGAGTTCG CAGGGAAACT AATACTTTAT ATTTTGATTT TTCATATCTG AAGCTTCGAT GTCGAGAGCA AACGACTTTA CATGATACGA AGATCAACCG TAAAAAGCTG GAAACTATTC TAGAGCGTAT TAACGCAGAG ATAACCTTAG GAACGTTTGA ATACGGTAAA TATTTTCCTA ATAGTTCGAT GCTGGCAAAA ATTGAAAAAG CGACCGCCAA ACTCGTCCCT GGTTATACCA AAACACCATT GTTTAAAGAT TTTGTTGAGG AGTGGTTTTC AGAAATGGAA CCAACATGGC GAAAAGCCAC TGCGGATGGT TATCGAAGTT ATCTCGATAA GCGTTTAATT CCTCATTTTG GAGAAATGGA AGTCAGCAGT ATCACCAAAG CAGAGATATT AAAGTACCGA GCACACGTCG CCAAACAGTC CGCCGGTAAG TTAAAGTCTA AGACGATTAA TAAATTTATT AAGTGTCTAA ATATGGTTAT GAATGAAGCC GCTGACCGAT ATGATTTTAC GCCACCACAT CTCAATATCA AGCCTTTGAA AGAAGAAAAG GTACATATCG ATCCTTTTTC TATTGAAGAG GTTAATCAGA TTCTTGCACA AGTGCGATCT GATTGGCGAG ACTATTTATT AGTTCGTTTC TTTACTGGGA TGCGTACTGG AGAGATTGAC GGTCTTAAGT GGGAGCACGT TGATTTTTCT CGTCGAGAAA TTCTTATTCG CGAGACTTAT TCTGCAGGTC GATGGGAGTA CACCAAAAAT GATGGGTCTC AACGAGAAAT CGAGATGTCC ACATTAGTCT ATAACACCTT ATCAAAACGG TTTAAAGAAC GAGACCCAAA ATCTGAGTTG GTGTTTTGTA CTGGAAATGG TGCGCCTGTT CATACACCTA ACTTCTTAAG AAGGGTTTGG AGGCCATTAC TTTCTTATCT TAAGCTCAAG TACCGTAAAC CTTATCAAAC GCGCCACACT GCCGCTACGA TTTGGTTAGC GGCAGGGGAA AATCCAAACT GGATTGCCAA ACAAATGGGA CATTCAACTA CTTCGATGCT TTTTACTGTC TACGCTCGTT ACGTTCCCAA CCTAACCCGT AAGGATGGTT CAGCGATGGA ACGTTTGTTG GCGTCGAACA TTGATGGTTT TCATGTAGCG GCTAATAAAG AGGAAAGCGT TGATGAAGAT AAGCCAGAAA GTTCTGAGGT ACTTGAACAA CAAAACGAAA TGGCATTCTG GGATCGGATC TTGCAGAACA CACAAGACTA TCGTTCAGGA GGTGGTCAAT GA
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Protein sequence | MGHIRVRRET NTLYFDFSYL KLRCREQTTL HDTKINRKKL ETILERINAE ITLGTFEYGK YFPNSSMLAK IEKATAKLVP GYTKTPLFKD FVEEWFSEME PTWRKATADG YRSYLDKRLI PHFGEMEVSS ITKAEILKYR AHVAKQSAGK LKSKTINKFI KCLNMVMNEA ADRYDFTPPH LNIKPLKEEK VHIDPFSIEE VNQILAQVRS DWRDYLLVRF FTGMRTGEID GLKWEHVDFS RREILIRETY SAGRWEYTKN DGSQREIEMS TLVYNTLSKR FKERDPKSEL VFCTGNGAPV HTPNFLRRVW RPLLSYLKLK YRKPYQTRHT AATIWLAAGE NPNWIAKQMG HSTTSMLFTV YARYVPNLTR KDGSAMERLL ASNIDGFHVA ANKEESVDED KPESSEVLEQ QNEMAFWDRI LQNTQDYRSG GGQ
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