Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2116 |
Symbol | |
ID | 3761297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2339197 |
End bp | 2341197 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637786864 |
Product | copper-resistance protein CopA |
Protein accession | YP_392379 |
Protein GI | 78486454 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2132] Putative multicopper oxidases |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAT CAAATAAAAG CGTACAACCG CAACTGGGCC GACGCCAGTT TGTTAAAGGC ATTGCGTTAA GCACCATTTC AGCTGCCATA GGATCTCATC TGCCTTCAGC TTGGGCTAAA GAAGAATTTT CAGCCATCGG CGCAGGGAAC TTGAACCCTA AACAGCCCGT TTTAATTGGA CCTGAATTTG ATTTAACCAT TTCAGAAACG CCTGTCAACA TTACAGGTTC ACCTGTCAAA GCAACCTTAA TCAACAACTC TTTACCCGCC CCAACATTGG TTTGGCGTGA GGGAGAGACT GTAACCATTC GCGTAAAAAA TACTTTGTCG GTTGATACGT CCATTCACTG GCATGGCATT ATTCTTCCCT TTCAAATGGA TGGTGTGCCG GGCTTAAGTT ATGACGGCAT CAAGCCTGGT GAAACGTTCA CTTATCAATT TACTGTGCAG CAACATGGAA CCTATTGGTA TCACAGTCAC TCCGAATTTC AGGAGCAAAC CGGATTGTAT GGAGCACTGG TTATTTTACC CAAAAAAGCA GATCCACTGG ATTACGACCA TGATTTCGTG ATTCAGCTGT CAGACTGGTC AGACAGTGCG CCCGATACCC TTTATTCAAA CATAAAGAAA ATGGGAGACT ATTACAATTA CAGCCAAAGA ACGGTGGGTG ACTTTTGGCA TGAAGTCAAA ACCTACGGCT TCTCCAAAGC ATGGGAAAAA CGGAAAATGT GGAACCAAAT GCGCATGACA GACCGTGATT TATCCGATGT CACGGGAGCA ACCTATACCT ATTTAATGAA TGGACTGTCG CCTAAAGCGC ATTGGCGTAC CGTCATTGAA TCAGGCAAAA AAGTGAGATT ACGATTTGTA AACAGCTCTG CAATGACTTT TTTTGATGTC CGTATCCCGG GCTTAAAAAT GACAGTGGTT GCAGCAGATG GAAATTTAGT CCAACCGGTT GAAATTGACG AATTCCGTAT TGGCGTTGCC GAAACTTATG ACGTCATTGT CGAACCGGAT ACGTCGAAAC AGGCTTATGC AATTTTTGCA CAAGCAATTG ACCGCTCTGG CTTCGCTATG GGTTCGATCA CATCGGATCC GACTCAATTA GCCGACTCGC CTGAAATGGA CCCTTTACCC ATCTTAAGCA TGACCGATAT GGGCATGGAA ATGGACATGG GTTCCACGTC ACACCCAATG AATATGGATG GTGAAATGGA AGGAATGAAC CCTTCATCTC AACCAATGAA CATGAATACT GACTCCCAGC GTATGACACC TTCTGATCAT AATTCGATGA ATGGAACGAA GCATGATATG AGTTCCATGC AACAACAAGA CTATGGCCAT GCTTTGGCTA TGGAGAAAAG CCAAATGGGG AAGGATGTCA GCAATGTTGA CCATTCCAAG CATTCTCATG GCATGGAGAA CATGAACGTG AATCTGGATG ACATTACGAT TCCGATGGAT ATGAATCCTC AGTTACCTCA AATCAAAACA CCTTCAGCAG AAGGTGCTCA AATTGGTATG AGAGCCATGG CTCCTCAATA TAGGCTGGAT GATCCAGGAG TTGGACTGAG AGAAAATGGT CGGAAGGTTT TGACATATGC CGACTTAAAA AACCGCTTCC CGACCCGACA TCATCCGAAA CCGACCAAGG AACTGGTTAT GCACTTGACC GGAAATATGG AACGCTACAT GTGGTCGATA AATGGCATTC CTTTTGAGGA GGCCGAACCT CTTAACTTTC AATACGGTGA TCGAGTGCGT ATTACCTTTA TTAATGACAC GATGATGAAT CACCCTATGC ACCTTCATGG CGTTTGGAGC GACCTTGAAA CGGGCGATGA AAACCATATT CCCCGCAAGC ACACGGTCAT TGTCCAACCC GGCTCTAAAA TAAGTTATCG AGTCACCATG GACGCCAAAG GCGACTGGGC TTATCACTGT CATTTGCTTT ATCACATGAT GGGCATGTTC AGAAAAGTAC AAATCCGATA A
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Protein sequence | MNTSNKSVQP QLGRRQFVKG IALSTISAAI GSHLPSAWAK EEFSAIGAGN LNPKQPVLIG PEFDLTISET PVNITGSPVK ATLINNSLPA PTLVWREGET VTIRVKNTLS VDTSIHWHGI ILPFQMDGVP GLSYDGIKPG ETFTYQFTVQ QHGTYWYHSH SEFQEQTGLY GALVILPKKA DPLDYDHDFV IQLSDWSDSA PDTLYSNIKK MGDYYNYSQR TVGDFWHEVK TYGFSKAWEK RKMWNQMRMT DRDLSDVTGA TYTYLMNGLS PKAHWRTVIE SGKKVRLRFV NSSAMTFFDV RIPGLKMTVV AADGNLVQPV EIDEFRIGVA ETYDVIVEPD TSKQAYAIFA QAIDRSGFAM GSITSDPTQL ADSPEMDPLP ILSMTDMGME MDMGSTSHPM NMDGEMEGMN PSSQPMNMNT DSQRMTPSDH NSMNGTKHDM SSMQQQDYGH ALAMEKSQMG KDVSNVDHSK HSHGMENMNV NLDDITIPMD MNPQLPQIKT PSAEGAQIGM RAMAPQYRLD DPGVGLRENG RKVLTYADLK NRFPTRHHPK PTKELVMHLT GNMERYMWSI NGIPFEEAEP LNFQYGDRVR ITFINDTMMN HPMHLHGVWS DLETGDENHI PRKHTVIVQP GSKISYRVTM DAKGDWAYHC HLLYHMMGMF RKVQIR
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