Gene Tcr_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2114 
Symbol 
ID3761295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2337945 
End bp2338391 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content44% 
IMG OID637786862 
Productcytochrome c, class I 
Protein accessionYP_392377 
Protein GI78486452 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT TGGTTTTATT ATTAACAAGT TTGAATCTGG TTGCTTGTTC TTCCAAAGAC 
AATCTTTTTG AAGTGAATGA CCCCACAAAA CGTTGGTATT CATCAAACGA TGTCAAAACA
GGACAACACC TTTTCAAACA GCACTGTGCC GTCTGTCACG GAGAAGAGGC TCAAGGAGTG
GTGACTGACT GGAAGCAACC GCTCGTGGAT GGCCATTACC CCGCTCCACC TCTCAATGGA
ACCGCGCACG CATGGCACCA TTCTCTCAAC GGACTTAACA GAACTATTTT ACAAGGTGGA
ATTCCACTTG GCGGAACAAT GCCGGCTTTT AAGAATAAAT TAACACCGGA AGAACGGCTA
CAAGCCATCG CTTATTTTCA AAGTTTCTGG TCGAATAAAA TCTACCAGGC CTGGCTAGAA
AGAGGAGGGT TAAAAAATGA CCGCTAA
 
Protein sequence
MKLLVLLLTS LNLVACSSKD NLFEVNDPTK RWYSSNDVKT GQHLFKQHCA VCHGEEAQGV 
VTDWKQPLVD GHYPAPPLNG TAHAWHHSLN GLNRTILQGG IPLGGTMPAF KNKLTPEERL
QAIAYFQSFW SNKIYQAWLE RGGLKNDR