Gene Tcr_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2106 
Symbol 
ID3761287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2328753 
End bp2329706 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content37% 
IMG OID637786854 
Producthypothetical protein 
Protein accessionYP_392369 
Protein GI78486444 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCG TATTGCCATT AAATAAAATA GTAGGTGTGT TGTTATACTT ACTTTCTTTT 
GGAAGTTATG CTGCACCGCT GGTATATATT CCTTTAGGAT CAGGGAATGA AGTTGTAGTC
ATGGATGCGG CAGATGGAAA AATAAAATAT GAAATTCCCG GCATTCCTAT GTCTCATGCA
GTAGTCGCGA CACCCGATGG CCAACATGTC ATTGCCAGTA GTTTAAAAGA GCCAAAGTTG
TATTTTATTT CTACGAAAAC GCATAAGGTT GTCAAAACCA TACCTCTTCC AAGTGTTACC
CATCATTTAG AAATTACCCC GAATGGAAGT TATGTTGTAT CTACACATTT AAAGATTAAG
CAGGTTAGTA TTACTGATTT AGCCACAAAT AAAGTTATAA AAACTTTAGA AACTGGCAAG
GTTCCAAATT ATGCCATTAT GAGTATGGAT AGCCGCTATG TTTATGTTAG CAATACGAGT
AGTAATAATA TTAGTGAAAT TGACCTTGAT AAGATGGCTG TGGTTAGAGA GCTGGATGGC
GGAGATCAAC CGACACACCT CATTTTTTCA AAAGACCAGG AAATGATTTA TGCTGCGAAT
CCGAGTATGC AAACTGTTGT AGCTATCGAC CGTAAAACCG GTGAAATTGT GAATGAGTAT
GAAATTGGCA AAAAGGTTCA TGGACTGGAT ATCAGTAATG ATGGCTCTCA GTTATTTGTA
AGCAGTATTA AAGATAATAA GGTTGCAGCA ATTCAATTAA AAACGGGGGC TATTAAGTTT
TTATCTTTAT CTCCGTCACC TTACCACTTA AATACTATTA AAGGAACGCA TAAAGTTTAT
GTATCTAGCC GCCAAAAACC GATCATATGG TTGTTAGATG AACGCTCCTT TGAAGTCCTA
CAAGCCATTT CTTTACCAAG AGGAGAGGGA CATCAAATAG CGGTTATTCA TTAA
 
Protein sequence
MNTVLPLNKI VGVLLYLLSF GSYAAPLVYI PLGSGNEVVV MDAADGKIKY EIPGIPMSHA 
VVATPDGQHV IASSLKEPKL YFISTKTHKV VKTIPLPSVT HHLEITPNGS YVVSTHLKIK
QVSITDLATN KVIKTLETGK VPNYAIMSMD SRYVYVSNTS SNNISEIDLD KMAVVRELDG
GDQPTHLIFS KDQEMIYAAN PSMQTVVAID RKTGEIVNEY EIGKKVHGLD ISNDGSQLFV
SSIKDNKVAA IQLKTGAIKF LSLSPSPYHL NTIKGTHKVY VSSRQKPIIW LLDERSFEVL
QAISLPRGEG HQIAVIH