| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2097 |
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| Symbol | |
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| ID | 3761278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2320746 |
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| End bp | 2322053 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637786845 |
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| Product | Outer membrane efflux protein |
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| Protein accession | YP_392360 |
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| Protein GI | 78486435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.771655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTTC ATACCCCATA TAGATTACAT AATAGAACTA CCGTTAATCG ACTTTTGAGT
GCGGCAACCC TGATCTCTTT ATCGTTAACC TCATTTGCGA GCTTGGCACA AACGCAGCCA
ACTGAATTGG TCGATTTAAC GACGGCGATT AACAAAACAC TTGCGAACCA TCCAAGCTTA
AACCAGTATC AATACCAGTT TAACGCTCAA CAAGGCATGC AAATTCAAGC GGGCGTTTCT
GCACCTACTA AAGTGTCGCT CTCTTTAGAA GACATGCTCG GAACCGGTGC AATGCAAGGC
TTAGATAATT CACAGTCTTC TCTAAGCATA AGCTGGGTAC TCGATAAAGA TATTATCAGT
AAACGAGTCA GTGTCGAAAG CTCTAAAAAA GAGATTATTG AGATTGAGCA GCAAATGAAT
AAAATTAATG TAGCGGCTCA AACCGCTCAA TATTTTTTAC ATACCCTGGC TCTACAAGAA
AAATTAACCA TTGCACAACA ATCGGTAAAA CAGTTAAGCC AAACCAAAGC GCAAATCAAG
CGACGCGTGC AGGCTGGTAA AACCTCCGAA ACCGACTTAT TAAGAGCACA ATCCGAGCTT
GAAACCGCCT TACTGCAACA AGAAGACGTT CTCCATGAAA TCAAGTCCGC TAAACGAATG
CTTGTTGCAC AATGGGGTGA AACGAATCCC AACTCGCTCA CCCTAAACGG TTCACTGCAA
AGTCAACCCA ATTTACTGAG TTTAGCGCAG TTAGAGCAAA AGCTTGAAAC TTCACCTGCG
CTGAAAAGGT TCATGGTATT AAAAGGCATT GCACAAACCA AAATCGATTT AGCTGAAGAA
CAATCTAAAG GTTTATGGCA AGTCTCAGCA GGAGTTAAAC GCCTGCAATC ATCGGGCGAT
TTTGGCTTAA TTGCAGGTGT AAGCGTACCA ATTATGCAGC GTAATAGAAA CCAAGGTTTT
ATTGCCGCTT TAACCGCACA ACAAAACCAA AACCAGTCTG AGTTTACCGC GCTTAAAAAG
CAAGTTGAAA CACAATTATT TGTACTCTAC CAAGAGCTAA AACATTCTCT GCATACGCAA
GAAGCATTGC AAGAGCGCAT TATTCCTAGC TTACAAAAAG CGTTAAATGA AGCAAACCGT
ATCTACTTAC AAGGTAAATA CAGTTATATG GAGCTTAACT CAGTACAAAG AGATTTATTA
AAAGCTCAGT CTAAACTGAT AGACGCCAAT TTGATGATGC ACCTAAAAAT GATTGCACTT
GAAAAGCTAA CTGGCATGCA GTTAACCCGA ATTGAAGAGA GAAAATAA
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| Protein sequence | MLFHTPYRLH NRTTVNRLLS AATLISLSLT SFASLAQTQP TELVDLTTAI NKTLANHPSL
NQYQYQFNAQ QGMQIQAGVS APTKVSLSLE DMLGTGAMQG LDNSQSSLSI SWVLDKDIIS
KRVSVESSKK EIIEIEQQMN KINVAAQTAQ YFLHTLALQE KLTIAQQSVK QLSQTKAQIK
RRVQAGKTSE TDLLRAQSEL ETALLQQEDV LHEIKSAKRM LVAQWGETNP NSLTLNGSLQ
SQPNLLSLAQ LEQKLETSPA LKRFMVLKGI AQTKIDLAEE QSKGLWQVSA GVKRLQSSGD
FGLIAGVSVP IMQRNRNQGF IAALTAQQNQ NQSEFTALKK QVETQLFVLY QELKHSLHTQ
EALQERIIPS LQKALNEANR IYLQGKYSYM ELNSVQRDLL KAQSKLIDAN LMMHLKMIAL
EKLTGMQLTR IEERK
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