| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2096 |
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| Symbol | |
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| ID | 3761277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2319496 |
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| End bp | 2320743 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637786844 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_392359 |
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| Protein GI | 78486434 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA TTTTTTATAC ATTACGTACT GGGCTTATTG CAAGCTTACT CATACTGGGT
ACGCCTTATA ACGTCATGGC TGAAAGTGGT CATAATGAAT CCGCTGAGAG CGAACACACT
GAACCAGAAA AAGGCGTTCA TGGTGGCCGT TTACTAAAAG ACGGTGATTT TGTGGTTGAG
CTGTCTATTT TCGAAAAAGG CGTGCCACCA GAATTCAGAA CTTGGGTGAC TTTAGAGGGT
CAACCCGTGG ATCCAAAAGA GGTGTCTTTA AACGTCACTT TATCTCGCTT GGGTGGCGTG
GAAGATAATA TCAATTTTAC CGTGCAAGAC GATTTTTTGC GTGGAGATAT GGAAATCTAT
GAGCCTCACT CTTTTGAAGT CACTCTTCAA GCAACCTACC AGGGCAAAAC CTATGAATGG
CATTACGATA ATTTTGAAGG CCGAGTAAAA ATCAAAGCCG ACATTGCAGA AGCGATGGAA
ATTAAAACGG AAATAGCATC CAGTGCCGTA TTAAAACAAA GTGTTCCAAC TTACGGCAAG
CTAGCAGTTG TGCCAGGTAA GACTGCACAT ATCTCAGCAC GTTTTGACGG CATCATTAAA
AAGGTCTATG TCCATCTTGG CCAAAAAGTC AACAAAGGCC AACGTTTGTT AACCGTTGAA
AGTAATGAAA GCTTAAAGTC TTACAACGTC ACTTCTCCTA TCAACGGTTA CGTGACTCAA
GTGAATGTAG CTATAGGCGA GCGAACTCAA GGTAAAGACT TGCTTCAAAT TGAAAACCAA
GACGAATTAA CCGCCGAATT ATTGGTCTTT CCCGCTCAAA CAAACCTCAT CAAACCAGGG
TTAAATGTCA GCTTATCAAT GAACAATATC AATCAAACCT TTACCGGTTC GGTGACGCAA
ATTGACCGTC AAGTTTTAAA CAGCCAAGCC CGAGTTGTCC GTGTTCGTGT CAACAATCAG
GCTGGCAAAC TTTCACCTGG TATGTTTGTA AAAGGGGATA TTGAAGTGAC CACCTTTACC
GTACCTTTAG CGGTAAAACG TAAGGCAATC CAAAGCTTTA GAGATTTCAA AGTTGTGTTT
GCAAAAATAG GTGAAGAGTA CGAGGTTCGT ATGCTTAAAC TTGGACGTGT ATCAGGTGAC
TGGGTAGAAG TGCTCGGCGG TTTAAAAGCC GGTACCGAAT ACGTTACTCA GAACAGCTAT
ATCATTAAAG CCGACATTGA AAAGTCTGGC GCTTCACACG ACCACTAA
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| Protein sequence | MNNIFYTLRT GLIASLLILG TPYNVMAESG HNESAESEHT EPEKGVHGGR LLKDGDFVVE
LSIFEKGVPP EFRTWVTLEG QPVDPKEVSL NVTLSRLGGV EDNINFTVQD DFLRGDMEIY
EPHSFEVTLQ ATYQGKTYEW HYDNFEGRVK IKADIAEAME IKTEIASSAV LKQSVPTYGK
LAVVPGKTAH ISARFDGIIK KVYVHLGQKV NKGQRLLTVE SNESLKSYNV TSPINGYVTQ
VNVAIGERTQ GKDLLQIENQ DELTAELLVF PAQTNLIKPG LNVSLSMNNI NQTFTGSVTQ
IDRQVLNSQA RVVRVRVNNQ AGKLSPGMFV KGDIEVTTFT VPLAVKRKAI QSFRDFKVVF
AKIGEEYEVR MLKLGRVSGD WVEVLGGLKA GTEYVTQNSY IIKADIEKSG ASHDH
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