| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2064 |
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| Symbol | |
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| ID | 3761225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2279403 |
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| End bp | 2281496 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786813 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_392328 |
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| Protein GI | 78486403 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.969634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCAA AAACTCCATT TAAGCCTTTG GCTTATCTCT CTGCCTCAGC CTTACTATTG
AGCTTACTGC ATAGCCCGTT TGCTTTATCG GACGATACGG TTGTATTAGC ACCGGTTAAA
GTCGAGGCGG ATTTAAGACA ATCCGAAGCG GAAGACATGC CGGTGAGCAT CACAGTGATC
GATTCGGCAG AATTACAAGA TGCAGGCGCG ACCCATACCG ACGATGTGCT TTTAAGCGCT
CCAAACGTCA ACGTTTCAAA CCAGAATGCT CGCATCAAAC ACATTCAAGT CCGCGGCATG
GGTGAGCGTG ATGAATATAC TGGCGCGCCC AATGCCAGCG TTGGGCTTGC TGTTGACGAC
ATCGATTTCA GCGGACTGGG CGGCATTGGA AGCTTATTTG ATGTGCAGCA AGTCGAAATC
TTGCGCGGCC CTCAAAACAC CCGTTATGGA CAAAGCGCCA TTGGCGGACT GATTAATATT
AAAAGCAATG ACCCAACCCC TTTTCACGAA AGCTTAATTG AAACCAGCAT CGGACAATAT
GGTCATAAAG AACTTGGCTT GATGACCAGT GGACCAATGA GCGATAAAAA AGACGCCACA
CAATATCGTA TTGCGGTTTT CAAACACCAA AGTGACGGAT TCTATAACAA CGCCACCTTG
AATCGCAAAG ACACCAATGC GAAAGACGAG CTGACGTTGC GTGGTAAATT GCGCATATTC
GCCACCGACA ACACCACGGT AGATTTAACC TTGCTGCACG CCGATTTTAA TGATGGCTAT
GATGCTTGGT CTCGCGACAA TACTTTTACG ACACGCTCTA ACCAACCCGG AAAAGACGAC
CAACTCTCCA ATGCGGCGGC CATGAAAGTC ACGTATGAAG GCAATACCGC TTATAACGTG
ATTTCCACCA CCAGCCTCTC AAACACAGAC GCACTTTATA ACTACGATGG TGACTGGCTG
GCCAAACCGG AACAGTTTTA TGAAAACCAA AAGCACCGTC GCCACATTTC ACAGGATGTA
CGATTCCAGT CGAAAGAATC GGCGCGTATT TTTAATGACT CAACCGACTG GTTAGTCGGG
GCTTACTACT CTAATATGGA CGAAAGCAAC TACACTGATA ACTATTATGC CGGTTGGACG
GAGTTGATTG ACAGTGATTT TAACCACCAA AAATTGGCGG CGTATTCGCA GCTAGACCAA
CACGTGAGTT CAAAACAAAC AATGACTTAT GGCCTGCGTC TTGAACATAA CCAGCAAACC
TTCAAACAAA CGAAAAAAAC CTATTCCGAC CAAACCCTGA CTGATGACTT TTCACCGGAT
GAAACGCTTT GGGGAGGGTC AATTCATTAC AAATACCGTT ACAACCCGAA CCACATGGCT
TTTGCCGGTG TTACTCGAGG CTATAAAGCG GGCGGATTTA ATGCAGGAAG CGGTTCCAGT
ACCAACGTCA CTTACGACGC GGAAACCTTA TTAGATTATG AAATTGGGTT AAAATCGAAT
TATCTGAATA ACCGCTTACA AACGGCCACC ACTCTTTTTT ATATGGATCG AAGCAACCCG
CAATTTGACG GCTATTCTTA TGACAGCGCC GGAGAATGGA TTTTCTATAA AGAAAACCTG
GATGCCGCTC AGAACTACGG TTTGGAAACT TCCTTTGACT GGCAAGCGAC CTACGCATGG
CAATTTTTCG GCTCGCTCGG TTTACTGTTT ACCGAAGTGG AAGGCATACC TCAGAACAGT
TCTTTTACCA TGTCTGGACG TGATCAGGCC CATGCACCAA ACTACCAATT CCACTTAGGC
ACACAGTATC GTGCTGCCAA TGGCTTTTTT GCCCGTACGG AAGTGCGAGG AATGGACAGT
TACTATTTTG ACAATGTGAA CAATGGAAAA ACCGGTGCAT ATCAAATCAT CAATGCCCGC
ATTGGCTATG AAGCAAAAGA TTGGGAAGTC TATGCATGGG GCAACAACTT AACCGATGAG
CGCTATGCCA CCCGAGGCTT TAAATTTGAC CATTATGATG GCGATGGTGT ACAAGAATAC
ATTCGTCTAG GCGACCCTCG TCAATTTGGC GCCACCTTGC GAGTTCACTT TTAA
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| Protein sequence | MTPKTPFKPL AYLSASALLL SLLHSPFALS DDTVVLAPVK VEADLRQSEA EDMPVSITVI
DSAELQDAGA THTDDVLLSA PNVNVSNQNA RIKHIQVRGM GERDEYTGAP NASVGLAVDD
IDFSGLGGIG SLFDVQQVEI LRGPQNTRYG QSAIGGLINI KSNDPTPFHE SLIETSIGQY
GHKELGLMTS GPMSDKKDAT QYRIAVFKHQ SDGFYNNATL NRKDTNAKDE LTLRGKLRIF
ATDNTTVDLT LLHADFNDGY DAWSRDNTFT TRSNQPGKDD QLSNAAAMKV TYEGNTAYNV
ISTTSLSNTD ALYNYDGDWL AKPEQFYENQ KHRRHISQDV RFQSKESARI FNDSTDWLVG
AYYSNMDESN YTDNYYAGWT ELIDSDFNHQ KLAAYSQLDQ HVSSKQTMTY GLRLEHNQQT
FKQTKKTYSD QTLTDDFSPD ETLWGGSIHY KYRYNPNHMA FAGVTRGYKA GGFNAGSGSS
TNVTYDAETL LDYEIGLKSN YLNNRLQTAT TLFYMDRSNP QFDGYSYDSA GEWIFYKENL
DAAQNYGLET SFDWQATYAW QFFGSLGLLF TEVEGIPQNS SFTMSGRDQA HAPNYQFHLG
TQYRAANGFF ARTEVRGMDS YYFDNVNNGK TGAYQIINAR IGYEAKDWEV YAWGNNLTDE
RYATRGFKFD HYDGDGVQEY IRLGDPRQFG ATLRVHF
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