Gene Tcr_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2063 
Symbol 
ID3761224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2278529 
End bp2279071 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content47% 
IMG OID637786812 
Producthypothetical protein 
Protein accessionYP_392327 
Protein GI78486402 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000388438 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAATC TAAGCGTTGA AAAAAAGAAG GGAACGAAGC AGGTGCCGCA CTTGATTGTG 
TTCGGTTTTA TTCTTTTTTT AGGTGTTTTT GGCGTAACTG TTCAGGCCGA TACCGGGCCT
GTCGTTACTG GCTGGGTCGA AAAAGTGGCT ATCCCTGAAT ACAATTTGAC GCTTAAAGCG
AAAGTGGATT CCGGTGCGGA CAGTTCTTCC TTACATGCGG TTTCTATTCA TCGATTTACT
AAAAACAACC AGGCCTGGGT GCAATTCAGA ACACAAGATG GGATAGCGAT TCAAAAACCG
GTTCTTCGGA TTGTTCACAT CAAAACGAAG ACAAAAGGCA CGCAAGCACG GGAAGTGGTC
GAACTGCCGA TTTGTTTAGC AGGGCAATTG ACAACCGTGC CAGTCAATCT TGTGGATCGA
AGCCACTTTT CGTATCCGAT GTTGATTGGA CGGTCGGCGA TGGCCGGACA GTTCCTGATT
AACCCGCACC AACAGTTTTT AACGGAACCG GAGTGTGCCT CTAAAGACGG TAAAGCGTCT
TAA
 
Protein sequence
MGNLSVEKKK GTKQVPHLIV FGFILFLGVF GVTVQADTGP VVTGWVEKVA IPEYNLTLKA 
KVDSGADSSS LHAVSIHRFT KNNQAWVQFR TQDGIAIQKP VLRIVHIKTK TKGTQAREVV
ELPICLAGQL TTVPVNLVDR SHFSYPMLIG RSAMAGQFLI NPHQQFLTEP ECASKDGKAS