| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2062 |
|---|
| Symbol | |
|---|
| ID | 3761223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2277468 |
|---|
| End bp | 2278532 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637786811 |
|---|
| Product | succinylglutamate desuccinylase/aspartoacylase |
|---|
| Protein accession | YP_392326 |
|---|
| Protein GI | 78486401 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000221832 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGCAAATCG TCCGATCAAA ATCGGGCCAG AAACCATTCA CCCTGGTGAA
CGCAAGACCG TTGATTTACA AGTTGGAAAA CTCTATACCC ACGGCGAACT CAATATGCCG
GTTCAAGTCA TTAATGGCAA ACAAAAAGGG CCCACATTGT TTGTCAGTGC CGCCATTCAT
GGTGATGAAT TGAATGGAGT CGAGATTATT CGACGCTTAA TGAAAGTCAA ATCACTCAAT
CGTTTAAAAG GTACCTTAAT CGCGGTGCCA ATTGTCAATT TATATGGTTT CATTAACCAA
AGCCGTTACC TGCCTGATCG ACGCGACCTC AACCGCAGTT TTCCCGGTTC CTCAAAAGGG
TCATTGGCCG GACGAATGGC CAATTTATTT TTAAAAGAAA TTGTGGCGCA ATGCTCACAT
GGTATTGACT TGCATACCGG CGCCATCAAC CGCACCAACT TACCCCAAAT TCGCGCGGAT
TTGGAAGACG CTGAAACCTT GGAAATGGCG ACGGCATTCG GTGCGCCGTT AATGATGAAT
GCTGCACTCC GTCCTGGTTC GTTAAGAGTT TCCGCCGTCA AAAAAGGCAT TCCGATTCTG
CTGTACGAGG CGGGAGAAGC TCTTCGATTT GATGAATTTG GCATTCGTGC CGGCGTTAAC
GGTATTTTAA ACGTGATGAA GTCTTTAGAC ATGATTGCGA AAGGGCGCTC CAAGAAAACC
CCGATCAAAC CCGTGATTGC CCGGTCAAGT TACTGGATTC GAGCACCACA CAGCGGCATT
TTCCGTTCTT TGGTCAGCGA TGGTGATCGT GTCCAAAAAG ACAAAACCGT GCTAGGGGTG
GTCTCCGACC CATTCGGCGA AGCGGAATTT GAAATTTGCG CCAATGCCAG CGGCATTGTG
ATTGGTCAAA TGGTCATGCC TTTAGTAAAC GAAGGAGAGG CGCTGTATCA CATTGCTCAA
TTTGCTCGTA CCGATCTGGC AGAAGAACGC GTTGGGTCGT TTGCCGAAGA CATTCATGGC
GATGATTACC TGCCTTACGA CAGTGACGAC ATTCCCTCTA TTTAA
|
|---|
| Protein sequence | MKKIANRPIK IGPETIHPGE RKTVDLQVGK LYTHGELNMP VQVINGKQKG PTLFVSAAIH
GDELNGVEII RRLMKVKSLN RLKGTLIAVP IVNLYGFINQ SRYLPDRRDL NRSFPGSSKG
SLAGRMANLF LKEIVAQCSH GIDLHTGAIN RTNLPQIRAD LEDAETLEMA TAFGAPLMMN
AALRPGSLRV SAVKKGIPIL LYEAGEALRF DEFGIRAGVN GILNVMKSLD MIAKGRSKKT
PIKPVIARSS YWIRAPHSGI FRSLVSDGDR VQKDKTVLGV VSDPFGEAEF EICANASGIV
IGQMVMPLVN EGEALYHIAQ FARTDLAEER VGSFAEDIHG DDYLPYDSDD IPSI
|
|---|
| |