Gene Tcr_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2039 
Symbol 
ID3761768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2252382 
End bp2252726 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content43% 
IMG OID637786788 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_392303 
Protein GI78486378 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAAT ATTCTATTGT TCAAGCGTTG ATCGAACAAT GTGAAACGTT GGCCCAAACG 
AATCAGGCAT TTCAGGTCTC AAAAGTGTCG GTAAAAGTGG GGTTGTTAAG TGGTGTAGAG
CCTTATCTGT TACAAACGGC ATTTGAGGCC TTTAAAAAAA CCAGTGATGT TTGTCAGCAA
GCTGAGCTGG ATATGAAAAT TCAAGCGGTA GAAGTCTTTT GTTTATGCTG TGGTGAAACC
AATCAACTGT CGGAACACCA TTATGTCTGT CCGGCTTGCC AAGGTGACCG AGTGACGGTT
ACGGATGGTA AAGAGATGTT TTTAATGCAG TTGGAAATGG CGTAG
 
Protein sequence
MHEYSIVQAL IEQCETLAQT NQAFQVSKVS VKVGLLSGVE PYLLQTAFEA FKKTSDVCQQ 
AELDMKIQAV EVFCLCCGET NQLSEHHYVC PACQGDRVTV TDGKEMFLMQ LEMA