| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2019 |
|---|
| Symbol | |
|---|
| ID | 3761219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 2228330 |
|---|
| End bp | 2229775 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637786768 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_392283 |
|---|
| Protein GI | 78486358 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAA GCGCGTTTTT AGAATTACCG AAAAACTTTT ATGAGTTGGT GCTGCCCGAA
CCCCAGCAAA ATGCTCGTTT GGTCACGGTC AATCACAGCC TCATGGACGA GTTGAATTGT
GATTTGAGTG ACAAGCAATT GCTGGCGCTG GCATCGGGCA ATTTAACCGA TGAAAGCTTG
ATTAACTTCA ATTTGATTCC GTTGGCGCAA AAATACACCG GTCATCAATT CGGCTATTAC
AATCCCGATT TGGGTGATGG GCGCGGTTTG TTGTTAGGGC AGTGGCATGA CAAAAATAAC
CAGGCCTGGG AGTTTCATCT CAAAGGTGCC GGGCGCACAC CGTTTTCGCG TCGGGGCGAT
GGGCGCGCCG TGTTGCGTTC CGTCATTCGA GAATATCTCG CTTCCGAAGC CTTACATGGT
TTGGGCGTGC CCACCACGCG CGCTTTGGCC ATTGCCAGCA GTCAGGAACA AGTGCAACGT
GAAATCTTTG AACCGCGCGC CAGCCTCATT CGCGTGACCC CCACGCATAT TCGTTTCGGC
CATTTCGAAT GGGCTGCTTC GTTGGGTAAA GACGCGTTGG ACGCTTTGAT TGCGTTTGTG
ATTCAACATC ATTATCCCGA GTTGGCCGAG TTGCCTGAAA ACGAACAAGC CGGTGCCTTA
TTGAAAGCCG TGTGCGGTCG CACCGCCACA TTGATGGCGA AATGGCAAGC GGTTGGCTTC
AATCACGGCG TGATGAATTC CGACAATATG TCGATTATCG GCGAGACGTT TGATTTCGGG
CCTTACGCCT TTTTCGATGA CTTTCAAATC GAATACATCT GTAACCATTC CGATGTGGAA
GGGCGCTATG CTTACAACCA GCAACCTAAA ATCGGCGTGT GGAACTGCCA AGTGCTCGCC
GCTGCGTTTG GGCAAAGTGT TACCGAGGCG GAACAAACCG CTGCGCTGGA TCATTTTGTG
CAAACCTATA ACCAACAGTA TGTGAGCGAA ATGAACGCCA AACTCGGTTT GGCAACCCAG
CAGGAGACGG ATAAAGATTT GATTGGTGAT TTGCTGGTGC TGATGGACAA GCAACGGGTC
GATTTCAGTT TGTTTTTCCG TCGCTTAGCC AAGCTAGGGC ACGCGGATGA AAATGATTTA
AGACGCTTGC TCAGCCAGCC AGAAGAATTT GAGCCTTGGT TTGAACGCTA CCATCAGCGT
GTGGCGCAAG AAGCGCTGAG CGAAGACAAA AGACAGCAAC GTATCCTCAA CAACAACCCC
TCGATTATCT TACGCAACTA CATTGCGCAA CAGATTATCG AAGCTGCCGA AGTGGGCAAT
TTTCAACCGC TGAATGACTG GGTCAAAGCG CTGCATTCCC CATTTGAAAA TCACCCGGGC
CTGGCCGAAT TTCAACAACC GCCAACCCCG GAACAGAAAG GCCTGCAACT GAGTTGCTCT
TCTTGA
|
|---|
| Protein sequence | MQQSAFLELP KNFYELVLPE PQQNARLVTV NHSLMDELNC DLSDKQLLAL ASGNLTDESL
INFNLIPLAQ KYTGHQFGYY NPDLGDGRGL LLGQWHDKNN QAWEFHLKGA GRTPFSRRGD
GRAVLRSVIR EYLASEALHG LGVPTTRALA IASSQEQVQR EIFEPRASLI RVTPTHIRFG
HFEWAASLGK DALDALIAFV IQHHYPELAE LPENEQAGAL LKAVCGRTAT LMAKWQAVGF
NHGVMNSDNM SIIGETFDFG PYAFFDDFQI EYICNHSDVE GRYAYNQQPK IGVWNCQVLA
AAFGQSVTEA EQTAALDHFV QTYNQQYVSE MNAKLGLATQ QETDKDLIGD LLVLMDKQRV
DFSLFFRRLA KLGHADENDL RRLLSQPEEF EPWFERYHQR VAQEALSEDK RQQRILNNNP
SIILRNYIAQ QIIEAAEVGN FQPLNDWVKA LHSPFENHPG LAEFQQPPTP EQKGLQLSCS
S
|
|---|
| |