| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2007 |
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| Symbol | |
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| ID | 3761207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2210344 |
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| End bp | 2211717 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637786756 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_392271 |
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| Protein GI | 78486346 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTTC TTGCGTTAAT CCTGTTTGCC CTAGTGTTTC TGGCCTTAAT GATTGGGTTT
CCCGTTGCGC TCACCCTTTC CGGAATTTCG TTGTTATTCG CCTTAGTGGC TGTTCAGTTC
GGCTGGTTTG ACATGGCTTT TTTACAAAGC ATTCCCAATC GTGTTTACTC CATTATGAGC
AACCCGACCT TAACCGCCGT GCCGCTGTTT GTGTTTATGG GCATCATGCT GGAACAATCC
AAGCTGGCCG AACAACTACT CGGCACCATG GATGAAGTCA TGCGGGGCTT TAAAGGCGGA
TTAGGCCTGT CTGTTATTTT GGTAGGGGCC TTACTGGCCG CCAGCACTGG CATCGTCGGC
GCTACCGTCG TCACCATGGG GCTACTGGCT TTGCCGACCA TGTTAAAACA AGGCTATTGC
CCTAAGCTGG CCACCGGCAC CATCTGCGCC TCCGGCACTT TAGGACAAAT CATTCCGCCG
TCCATTATTT TGATTTTACT TGGGGATGTC TTATCTTCGT CTTATCAACA AGCGCAGCTG
AACCAAGGGA TTTTTTCGCC TGAAACCCTA TCGGTAGGAG ACCTCTTTAT TGGTGCGCTT
TTTCCGGGAA TGTTGTTAGT GGTGTTGTAC ATGCTCTACG TGTTTGCAAT GGCGATGTTA
AAACCTGAAA CCGTGCCGGC CGATTCCAAT GTAAAACACC CACCGGGCTT AGGAAAGCGC
GTCATCAACA GCTTGATCCC ACCGCTGGCA CTCATTTTAT TGGTTTTAGG CTCTATTTTA
GGGGGCTATG CTACCCCGAC GGAAGCAGCG TCACTCGGAG CACTCGGCGC CATGCTGCTT
GCCGCGGCCA AAAATCGATT GAACCTCAGT ATGATTCAAA CGGTGATGCG CGGCACATTG
CAAGTCACCA GCATGATCTT CCTGATTTTT ATCGGCGCGG CTTTCTTCTC GCTGACCTTC
CGAGGGCTTG GTGGTGACGA ACTGATGCAG GAATTCTTAA TGGATCTACC GGGCGGCGTC
TTTACGGCAG TGCTCATCGT CATGATTTTG ATGTTTGTCA TCGGGTTCTT TTTAGACTTC
ATTGAAATCA CTTACATCAT TGTACCGGTC GTCGCACCCA TCTTACTTAT GATGGGGGTC
GATCCAATCT GGCTTGGTAT TATGATTGCG ATTAATTTAC AAACCGCTTT CCTCACCCCA
CCCTTTGGAT TCGCGCTGTT TTATTTACGC GGCGTCACCC CTGCTTCGGT CAAAACCGTC
GATATCTACA AAGGGGTCAT GCCGTATATT TTGATTCAGC TTTCGGTGTT GGTCATGCTC
GCCATTTGGC CAGAACTGGC GACTTGGCTA CCCAGCGTAA TCTATGACAA TTAA
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| Protein sequence | MEVLALILFA LVFLALMIGF PVALTLSGIS LLFALVAVQF GWFDMAFLQS IPNRVYSIMS
NPTLTAVPLF VFMGIMLEQS KLAEQLLGTM DEVMRGFKGG LGLSVILVGA LLAASTGIVG
ATVVTMGLLA LPTMLKQGYC PKLATGTICA SGTLGQIIPP SIILILLGDV LSSSYQQAQL
NQGIFSPETL SVGDLFIGAL FPGMLLVVLY MLYVFAMAML KPETVPADSN VKHPPGLGKR
VINSLIPPLA LILLVLGSIL GGYATPTEAA SLGALGAMLL AAAKNRLNLS MIQTVMRGTL
QVTSMIFLIF IGAAFFSLTF RGLGGDELMQ EFLMDLPGGV FTAVLIVMIL MFVIGFFLDF
IEITYIIVPV VAPILLMMGV DPIWLGIMIA INLQTAFLTP PFGFALFYLR GVTPASVKTV
DIYKGVMPYI LIQLSVLVML AIWPELATWL PSVIYDN
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