| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2006 |
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| Symbol | |
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| ID | 3761206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2209766 |
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| End bp | 2210344 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786755 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_392270 |
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| Protein GI | 78486345 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.404305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAACC TAACCTCTGC TCTTGTCCAG TTTGTAATCA AACAAAACCA ATTTCAAAAA
TCAATCGGGC ACCTTACCGC ATGGCTGGCA CTCTCTCTGG TTCTTCTTTC GGCGTTAATC
GTCGTATTGC GATATGGCTT CAATAGCGGT TCCATCGCGC TGCAAGAAAG CATTTTGTAT
AACCATGCGA TCTTTTTTAT GATGGGCATG GCTTACACTC TTCAACAGGA CCGACATGTC
CGAGTCGATG TGTTTTACAG CCAAATGTCG CCCTCACGTC AGGCCTGGGT GAATTTGATT
GGTGGACTTT TATTTGCCTT GCCTACCTTG GTATTTCTGC TCTGGGTCAG CTGGGATTAT
GTCAGTGGCA GCTGGGCCAT TTATGAAGGG TCTTCTGAAG CCGGCGGACT GCCTTATCTT
TACCTACTGA AAAGTTTCAT TTTAATTATG GGCGGGCTCA TGCTTTTGCA AGTAGTGGCG
ATGATTGCGG AATCTTATTT GCAGATTGCA ACGCCGGATC ATGAGGGCGT GAAAGAACTG
CTTGTACAAA AACAATCCGA TCGCAAGGAG ATGTTTTAA
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| Protein sequence | MTNLTSALVQ FVIKQNQFQK SIGHLTAWLA LSLVLLSALI VVLRYGFNSG SIALQESILY
NHAIFFMMGM AYTLQQDRHV RVDVFYSQMS PSRQAWVNLI GGLLFALPTL VFLLWVSWDY
VSGSWAIYEG SSEAGGLPYL YLLKSFILIM GGLMLLQVVA MIAESYLQIA TPDHEGVKEL
LVQKQSDRKE MF
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