| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2002 |
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| Symbol | |
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| ID | 3761202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2205059 |
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| End bp | 2205964 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786751 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_392266 |
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| Protein GI | 78486341 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00230596 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGGCAGC TTGAAGACAT TCAAGTCTTT GTTCGAGTGG TTGAAGCTGG CGGAATCGGT
AAGGCGGCTG AACAATTGAA CTTGGCAAAA TCTGCGGTGA GTCGACGATT GGCTGACTTG
GAAGACCGTC TTGAAACCAA GTTGATTAAT CGGACGACTC GAAAATCAAG CTTAACCGAA
GCGGGCCAGA TTTATTACGA AAAAGCGTTA TCGGTGTTGG ATTCTGTGAC GGAAATGAAT
CAAATGACGG TTTCCCGAGA AGCCAGCTTG GAGGGAACTT TAAGGTTAGC GGTACCTCTT
TCGTTTGGTT TGGAGCATTT GTCGCCCGCG TTAGACCGCT TTGCACAGGA ACATCCGAAC
TTAACGTTGC ATGTCGACTT TTCAGATCGG GAAGTGGATA TTGTGGAAGA AGGGTTTGAT
TTGGCTTTCC GTATTACCGA TTTAAAAGAT TCAACGATTC AAGCGCGAAA AATCGCACCG
ATTCGGTTCG TGATGTGCGC CAGTCCGGGG TATTTAAAAA AATACGGAAC ACCGAAAACG
GCCGAAGATC TAAAACAACA TAAAATCTTA CGCTATGGAT CGAAAGGCGC TGAAAGTTGG
CATTTGATTG GGCCGGATAA TCAAACGCAT CATTTAAATT TGCCCAGTCA TCTCTATTCG
AATAATGGCA GTTTTCTGTT GAGTATGGCG AAAGCCGGTC ATGGGATTGC ATTGGAGCCG
ACATTTATCG CCTGGGAAGC ATTGGCAACA GGTGAACTGA CCCCTGTTTT AACGGATTAC
CGGATTCCAA TAATGCATGC TTATGCGGTG TATCCACAGA ACCGATTCCT TTCTCAAAAA
GCCCGTGCGT TTATTGATTT TCTGGTCGCA CGTTTCGGCA ATAACGCTTA CTGGGATCAA
GGTTGA
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| Protein sequence | MGQLEDIQVF VRVVEAGGIG KAAEQLNLAK SAVSRRLADL EDRLETKLIN RTTRKSSLTE
AGQIYYEKAL SVLDSVTEMN QMTVSREASL EGTLRLAVPL SFGLEHLSPA LDRFAQEHPN
LTLHVDFSDR EVDIVEEGFD LAFRITDLKD STIQARKIAP IRFVMCASPG YLKKYGTPKT
AEDLKQHKIL RYGSKGAESW HLIGPDNQTH HLNLPSHLYS NNGSFLLSMA KAGHGIALEP
TFIAWEALAT GELTPVLTDY RIPIMHAYAV YPQNRFLSQK ARAFIDFLVA RFGNNAYWDQ
G
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