| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1996 |
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| Symbol | |
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| ID | 3762308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2195351 |
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| End bp | 2197240 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637786745 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_392260 |
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| Protein GI | 78486335 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTGTT ATTTAGCGGA GAATGGTTTA TTTTGGCGCT CCGATTTAAA ACGGTTTTTA
TCACACAGAG AGTTTATGTC CGATTCGAAA GATGTCAATG CGTTATCCCT TTTACAAACC
GTTTTTGGAT ATGATGCTTT TCGTTCTCAT CAAGCCGAAA TTATTGATGA TTTGGTTGCC
GGGTCAGATT GCTTTGTGCT GATGCCAACG GGCGGCGGAA AATCGCTCTG CTATCAGATT
CCCGCTTTGA TTCGCCTGGG AACAGCCATT GTAGTGTCTC CGTTAATTGC ATTGATGCAA
GACCAAGTCA GTGCCTTGAA AGCCAATGGG GTGAAGGCGG CTTACTATAA TTCCACTTTG
GATTACGAAT CGGCCGATCA AGTCTTGATG CAACTGCATA CTGGGCAGTT AGATTTATTA
TATGTGTCTC CAGAGCGCTT ACTGAACCAA ACGTTTTTTC AACAGTTACA ACAGTTGCCG
ATTGCATTAT TTGCGATTGA TGAGGCGCAC TGTATTTCAC AATGGGGACA TGACTTCCGA
CCGGAATACA GCAAAATTGG GCAACTGCGA GACTATTTTC CACAGGTACC TTTTATTGCC
TTAACGGCGA CGGCCGATGC CGCGACCCGC CAGGACATTT TGCAACGCTT GAATTTGCAT
CAACCTCATG TGCATGTCAG CAGCTTTGAT CGCCCTAATA TTCGATATAC CGTGTTTGAA
AAACGTCAGC CGATGAAGCA GTTGCTCAGT TTTTTGGACG CTCGTCCAGG CCATCAAGAA
AGTGGTATTG TGTATTGTCT GAGTCGAAAG CGCGTCGAAG AGGTGGCATT GCAGTTGCAA
GATAAGGGTT ATCGTGCGAA AGCGTACCAT GCAGGCTTGC CCGGTGACAT CCGACAGACC
GTACATCAGC AGTTTATTCG AGATGAAATT GATATCGTGG TGGCCACTGT GGCATTCGGC
ATGGGCATTG ACAAGCCGAA TGTGCGGTTC GTGGTACATT ATGATTTGCC GAAAAACATC
GAAGGCTATT ACCAAGAAAC CGGACGAGCG GGCCGTGATG GGTTGGAATC GGAAGCGTTA
CTGTTATACG GTGCGCAAGA TATTGTCACG GCGCGACACT TTGTCGAGAA CAATCCGAAT
GAAGCCCAGC GTCGCATTGA AAGTTTTAAG TTGAGTTGTA TGGTCGACTT TGCCGAAGCG
CAATCTTGTC GCCGCAGTGT GTTATTGAAT TACTTTGATG AAAGAACCGA TAACGCATGC
GGGAACTGCG ATATTTGTTT GAACCCGCCT CGGTTTTTCG ATGCTACGGT TGCGGCGCAA
AAAGCGCTGT CTTGCGTCTA TCGGCTCGAT CAAGGGTTTG GGGTGCGTCA TGTCATTGAT
GTTCTACGAG GGATGGAGCA TGAGCGCATT CGTCAGCTGA ACCACCAAAG CTTGAGCACC
TATGGCATTG GCAAAGAATA TTCGGCTGTG GAATGGGACA GTATTATTCG CCAGTTGATT
CATTTAGGGT ACTTGGTGCA GGACATTCAA CATTATTCCG TGCTCAAACT GACCGAAAAA
GCGGGTGACA TTCTCAAGGG AAAAGTGGCG CTGCAATTGG CCTTGCCGCG TAATAAAGTG
GCCAAGTCGA CTCGAGGCGG TCAGAAAAAT AAAGCCGACT TAACGGCAGA TGAACTGGAA
CGCTTTGAAA CCTTACGCCG TTTGAGGAAA GACATTGCTG ACAGCGAAGA GCGTCCGGCT
TATCAGGTAT TTGGCGATGC CGCTTTGATT GAGATGGCGA AAAAATGCCC TCAAAATGAT
TCAGAGCTGT TGGCGATCAA CGGAGTAGGC GAAAGTAAAT TGGAAAGATA TGGCTTTGAA
TTCCTCAACC AACTGCGTCA GTTTGATTAA
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| Protein sequence | MTCYLAENGL FWRSDLKRFL SHREFMSDSK DVNALSLLQT VFGYDAFRSH QAEIIDDLVA
GSDCFVLMPT GGGKSLCYQI PALIRLGTAI VVSPLIALMQ DQVSALKANG VKAAYYNSTL
DYESADQVLM QLHTGQLDLL YVSPERLLNQ TFFQQLQQLP IALFAIDEAH CISQWGHDFR
PEYSKIGQLR DYFPQVPFIA LTATADAATR QDILQRLNLH QPHVHVSSFD RPNIRYTVFE
KRQPMKQLLS FLDARPGHQE SGIVYCLSRK RVEEVALQLQ DKGYRAKAYH AGLPGDIRQT
VHQQFIRDEI DIVVATVAFG MGIDKPNVRF VVHYDLPKNI EGYYQETGRA GRDGLESEAL
LLYGAQDIVT ARHFVENNPN EAQRRIESFK LSCMVDFAEA QSCRRSVLLN YFDERTDNAC
GNCDICLNPP RFFDATVAAQ KALSCVYRLD QGFGVRHVID VLRGMEHERI RQLNHQSLST
YGIGKEYSAV EWDSIIRQLI HLGYLVQDIQ HYSVLKLTEK AGDILKGKVA LQLALPRNKV
AKSTRGGQKN KADLTADELE RFETLRRLRK DIADSEERPA YQVFGDAALI EMAKKCPQND
SELLAINGVG ESKLERYGFE FLNQLRQFD
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