Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1991 |
Symbol | |
ID | 3762303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2189694 |
End bp | 2190242 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637786740 |
Product | outer membrane lipoprotein, lipocalin |
Protein accession | YP_392255 |
Protein GI | 78486330 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.486908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTTG CTCATTGGCT GACAAGACTT CTAGGCTTAT TGAGCCTTTC CTTACTCAAT GGCTGTACCC AACCACCCGA AGGCGTGACG CCCGTCAGAC CCTTTGAACT TCAGTCCTAC CTAGGACGCT GGTATGAAAT TGCTCGATTG GACCATTCGT TTGAAGAAGG GCTCACCGAA GTGACCGCCA CTTACACACG CCGAGAGGAT GGCGGCGTTA AAGTAATCAA CCGTGGCTGG AATCGTGAGA AAAATACGTG GAAAGAGGCC ATTGGTAAAG CTTATTTTCT GGGCTCCGAA AACGTTGGAA GCCTAAAGGT TTCTTTTTTC GGGCCTTTCT ATGGTGGCTA CCATATTGCC AAACTGGACC CAGACTACCA AATGGCATTG ATCGTCGGGC CATCAAAAGA TTATGCTTGG GTTTTAGCGC GACAAAAGCA CCCGACTCAA ACACAATGCG CTTTATATTT TGAGGCTGCA AAACAACTTG GAATCCGCAA AGACCAGTGG ATTCACGTTC AGCCCTGTCA AGAGACCAAT CCCTCTTAA
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Protein sequence | MRFAHWLTRL LGLLSLSLLN GCTQPPEGVT PVRPFELQSY LGRWYEIARL DHSFEEGLTE VTATYTRRED GGVKVINRGW NREKNTWKEA IGKAYFLGSE NVGSLKVSFF GPFYGGYHIA KLDPDYQMAL IVGPSKDYAW VLARQKHPTQ TQCALYFEAA KQLGIRKDQW IHVQPCQETN PS
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