Gene Tcr_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1991 
Symbol 
ID3762303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2189694 
End bp2190242 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID637786740 
Productouter membrane lipoprotein, lipocalin 
Protein accessionYP_392255 
Protein GI78486330 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.486908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTTG CTCATTGGCT GACAAGACTT CTAGGCTTAT TGAGCCTTTC CTTACTCAAT 
GGCTGTACCC AACCACCCGA AGGCGTGACG CCCGTCAGAC CCTTTGAACT TCAGTCCTAC
CTAGGACGCT GGTATGAAAT TGCTCGATTG GACCATTCGT TTGAAGAAGG GCTCACCGAA
GTGACCGCCA CTTACACACG CCGAGAGGAT GGCGGCGTTA AAGTAATCAA CCGTGGCTGG
AATCGTGAGA AAAATACGTG GAAAGAGGCC ATTGGTAAAG CTTATTTTCT GGGCTCCGAA
AACGTTGGAA GCCTAAAGGT TTCTTTTTTC GGGCCTTTCT ATGGTGGCTA CCATATTGCC
AAACTGGACC CAGACTACCA AATGGCATTG ATCGTCGGGC CATCAAAAGA TTATGCTTGG
GTTTTAGCGC GACAAAAGCA CCCGACTCAA ACACAATGCG CTTTATATTT TGAGGCTGCA
AAACAACTTG GAATCCGCAA AGACCAGTGG ATTCACGTTC AGCCCTGTCA AGAGACCAAT
CCCTCTTAA
 
Protein sequence
MRFAHWLTRL LGLLSLSLLN GCTQPPEGVT PVRPFELQSY LGRWYEIARL DHSFEEGLTE 
VTATYTRRED GGVKVINRGW NREKNTWKEA IGKAYFLGSE NVGSLKVSFF GPFYGGYHIA
KLDPDYQMAL IVGPSKDYAW VLARQKHPTQ TQCALYFEAA KQLGIRKDQW IHVQPCQETN
PS