Gene Tcr_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1988 
Symbol 
ID3762300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2186912 
End bp2187388 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content44% 
IMG OID637786737 
Producthypothetical protein 
Protein accessionYP_392252 
Protein GI78486327 
COG category[S] Function unknown 
COG ID[COG3184] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.830663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCACT CCAAGCTCGT TCATTTTTTA ATTGGGTTTG TCTTAAGTTT GACACCCCTC 
TATGCGTTAT CCGAAGACGC TCAACCCGCG TCGAAAGAAA GTATTCAAAC CCTGATGCAA
ACCACCGGAG CGGCCAACAT GGCGAAACAA ATGTCGGTGC AGATTATTCC GATGCTCAAA
AAACTGGTGC CGGAAGCACC CGACAGCTTC TGGGAAGATT TCTTCAAAGA GATCAACGCC
GAACAAATTA ACGAATTGAT TATCCCTATT TACCAAAAGT ATTTAACGGA ACAGGATGTT
CAAGCGATCA ATGCCTTTTA CCAAAGTCCA GTCGGCCAAA AACTCATTCG GGTTCAACCT
CAAATTTCCA AAGAATCGAT GGTGGCAGGT CAACTTTGGG GTCAGAAAAT CGCTCAAAAA
GTCATCCAAA AATACCAACA ACAACAAAAA CAAGCGCAGA CCAAGCCGTC AGAATAA
 
Protein sequence
MMHSKLVHFL IGFVLSLTPL YALSEDAQPA SKESIQTLMQ TTGAANMAKQ MSVQIIPMLK 
KLVPEAPDSF WEDFFKEINA EQINELIIPI YQKYLTEQDV QAINAFYQSP VGQKLIRVQP
QISKESMVAG QLWGQKIAQK VIQKYQQQQK QAQTKPSE