Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1988 |
Symbol | |
ID | 3762300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2186912 |
End bp | 2187388 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786737 |
Product | hypothetical protein |
Protein accession | YP_392252 |
Protein GI | 78486327 |
COG category | [S] Function unknown |
COG ID | [COG3184] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.830663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCACT CCAAGCTCGT TCATTTTTTA ATTGGGTTTG TCTTAAGTTT GACACCCCTC TATGCGTTAT CCGAAGACGC TCAACCCGCG TCGAAAGAAA GTATTCAAAC CCTGATGCAA ACCACCGGAG CGGCCAACAT GGCGAAACAA ATGTCGGTGC AGATTATTCC GATGCTCAAA AAACTGGTGC CGGAAGCACC CGACAGCTTC TGGGAAGATT TCTTCAAAGA GATCAACGCC GAACAAATTA ACGAATTGAT TATCCCTATT TACCAAAAGT ATTTAACGGA ACAGGATGTT CAAGCGATCA ATGCCTTTTA CCAAAGTCCA GTCGGCCAAA AACTCATTCG GGTTCAACCT CAAATTTCCA AAGAATCGAT GGTGGCAGGT CAACTTTGGG GTCAGAAAAT CGCTCAAAAA GTCATCCAAA AATACCAACA ACAACAAAAA CAAGCGCAGA CCAAGCCGTC AGAATAA
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Protein sequence | MMHSKLVHFL IGFVLSLTPL YALSEDAQPA SKESIQTLMQ TTGAANMAKQ MSVQIIPMLK KLVPEAPDSF WEDFFKEINA EQINELIIPI YQKYLTEQDV QAINAFYQSP VGQKLIRVQP QISKESMVAG QLWGQKIAQK VIQKYQQQQK QAQTKPSE
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