| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1987 |
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| Symbol | |
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| ID | 3762299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2184370 |
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| End bp | 2186694 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637786736 |
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| Product | primosomal protein N' (replication factor Y) |
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| Protein accession | YP_392251 |
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| Protein GI | 78486326 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGTTA AAGTTGCCGT GCCCGGCCCT TTTTTATCCC CTTTGGATTA TCGCATTCAG
GCTGAAAAAG CGGATCATCG GATAGAAACA TTGGCGTTGG ATTTAGAACC GGAAGAGCAG
ACAGAGTCTA AAAAATCTTT TTTGCCTGTG GTCGGCGGGC GTGTCAAAGT TCCCTTTCGC
AATAAATCTT TGATTGGCAT TGTGATGGCG TTAAGTGATG ACGCGACGGT TGCCACTCAA
AAGCTCAAAG CGCTTGAAGA TGTAATTGAT GAAATGCCGA TTTTTTCTGA ACAGGAAATG
GCGTTACTCA GTTGGGCCAG TCATTATTAC CATGAGCCGA TTGGCAACGT CGTGCAAACA
GCCCTTCCGA AACGATTAAG AGAAGGCGAG GCGGTTGACG TGGCTGGCGT GTCGGCATGG
CAGTTGACCG AGGCCGGGCG AGAAGCAGAC GAACAGATAC CGTCTCGAGC CACGCAACAA
AAAGCGTTAT GGCAACTGCT GCAACAGCAA GACGAGGCGC TGACAGCGGA AGTTTTAAAC
CGCTCTTTGA ACCAATGGCG CCTTCCTATG AAACGGTTTC AGGAAAAGGG CTGGGTGGCT
GAAACTGAAA AAAGTTGCCT GCATGCCATG CCGGTGCGTG AAAAAACAGC CAGGCCTGGT
CATATTTTAA ATGCCGAGCA GCAAGCTGCG GTGGATGCGG TTTTGGCAAC GTCTGGATTT
GATGCTTTTC TGGTAGAAGG GGTGACAGGC AGCGGTAAAA CGGAAGTCTA TCTAGGTATG
ATTGAATCGG TCATAGCCCA AGGAAAACAA GTGTTGGTGT TGGTACCGGA GATTGGATTA
ACACCGCAAA CAGTGAAACG ATTTGAAGCG TATTTGCAAG CGCCTGTTGC CGTGATGCAC
TCTGGCCTTA ATGATAAAGA GCGTCATTGC GCCTGGTCGT TGGTGAAGAC GCATCAAGTG
AATGTTTTAC TGGGAACGCG TTCAGCGATT TTTACGCCCT TTGCGGATTT AGGGTTGTGC
ATTATGGATG AAGAGCATGA CTTATCCTTT AAGCAGCAAG ATGGGTTTCG CTATTCGGCT
CGTGACTGCT TGGTTCGTCG AGCTCAGTTG GAAAATGTGC CGGTGGTATT AGGGTCGGCA
ACCCCGTCTC TAGAAACCTT GCATAATGCG TTAAGCGGAC GGTATCAACA TTTGCATTTA
AAGCAGCGAG CAGGCCAGGC CAAAATGCCT GAGGTTCAAT TGTTGGATGT TCGCGGGCAA
GCTGAAGAAG AAGGCATCTC CCAACCGTTA AGGCAGGAAG TGGAAACCCA TTTAAAAGCC
GGCGGGCAAG TGCTGTTATT TTTAAATCGA CGAGGCTTTG CGCCAGTGTT GATGTGCCAT
GACTGTGGCT GGCAAGCGGC TTGCCCGAGT TGTGATGCCA ATATGACCTT TCATCAGCAA
GTGAATGAAC TTCGTTGCCA TCACTGTGGC TATCAAGCAA AAGCACCGTT GGACTGTCCA
AATTGTGGTT CGGCTTCCTT TGCTAAAATC GGTCAGGGCA CGGAGCGATT GGAAACGGTG
GTCCAGCAAT GGTTTCCTGA TTATAAAGTC TTGCGAGTGG ATCGCGACAC GACGCGTAAT
AAAGGTCAAA TGATGGCTTT GACGGAACAA GCCAGTCAAG GTCGAGCCGA TATCCTCATC
GGTACCCAGA TGTTAGCAAA AGGGCATCAT TTTCCAAAAG TGACGTTGGT CGGATTACTT
GATATTGATC AAGGACTTTT CAGTTGTGAC TTTCGTGCGG CCGAACGTAT GGCACAATTA
GTGGTGCAAG TCTCAGGCCG AGCCGGACGA GGGGAACGGC CCGGTCAGGT GGTGATTCAA
ACGCACCACC CTGAACACCC GTTATTGAAA GTGTTGGTGG CGCGTGGGTA TGAGGCGTTT
GCGAAAGAAG CTTTAAAAGA GCGTGAACAA GCCGATTTGC CGCCTTATCA GTACCAGGTG
TTATTGCGAG CCGAGGCGGT GGATGCGAAT GCGGGCTGGA CATTTTTAAA TGACGTTAAA
AGTGCATTGA ACTTTGCTAA AATGTCGATG TTGCGTTCGT ATTTATCAGT AAACGATTCA
GACGATATTA AGGCAGAGAT GTTACAGGGG CTGGAGGTGT TTGGTCCTGT GAGTGCTCCG
ATGCTTCGTC GTCAAGGGCG ATACCGTTAT CAGTTGTTGT TACAAGGTGC GCATCGTGGC
TTTTTACATC AATGGTTGGC TCAGGTTGAA ACGCAGCTTT ATACGTCCAA TCAAGCTAAG
AAAGTTCGTT GGTCGTTAGA TGTTGATCCA CAGGAAATGA GTTAA
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| Protein sequence | MFVKVAVPGP FLSPLDYRIQ AEKADHRIET LALDLEPEEQ TESKKSFLPV VGGRVKVPFR
NKSLIGIVMA LSDDATVATQ KLKALEDVID EMPIFSEQEM ALLSWASHYY HEPIGNVVQT
ALPKRLREGE AVDVAGVSAW QLTEAGREAD EQIPSRATQQ KALWQLLQQQ DEALTAEVLN
RSLNQWRLPM KRFQEKGWVA ETEKSCLHAM PVREKTARPG HILNAEQQAA VDAVLATSGF
DAFLVEGVTG SGKTEVYLGM IESVIAQGKQ VLVLVPEIGL TPQTVKRFEA YLQAPVAVMH
SGLNDKERHC AWSLVKTHQV NVLLGTRSAI FTPFADLGLC IMDEEHDLSF KQQDGFRYSA
RDCLVRRAQL ENVPVVLGSA TPSLETLHNA LSGRYQHLHL KQRAGQAKMP EVQLLDVRGQ
AEEEGISQPL RQEVETHLKA GGQVLLFLNR RGFAPVLMCH DCGWQAACPS CDANMTFHQQ
VNELRCHHCG YQAKAPLDCP NCGSASFAKI GQGTERLETV VQQWFPDYKV LRVDRDTTRN
KGQMMALTEQ ASQGRADILI GTQMLAKGHH FPKVTLVGLL DIDQGLFSCD FRAAERMAQL
VVQVSGRAGR GERPGQVVIQ THHPEHPLLK VLVARGYEAF AKEALKEREQ ADLPPYQYQV
LLRAEAVDAN AGWTFLNDVK SALNFAKMSM LRSYLSVNDS DDIKAEMLQG LEVFGPVSAP
MLRRQGRYRY QLLLQGAHRG FLHQWLAQVE TQLYTSNQAK KVRWSLDVDP QEMS
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