Gene Tcr_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1983 
Symbol 
ID3762295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2177961 
End bp2178974 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content43% 
IMG OID637786732 
Producthypothetical protein 
Protein accessionYP_392247 
Protein GI78486322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTAT GGATGAAGGG AACGTTTTTC GCTCTGACGG CTTGGGCGGT GATGTCTATT 
ACAGGGTGTT CCAAGAATGT AAAGATTCAA GTCTTGGAAC CAGCCAAGAT TGATCGTGCA
GCTCAGACAA AGCAAATTGC GGTTTCCGAT TTCAAAGACG ATACGGTGGG GCTGGCGGGC
AAGATAGAAG CCTTGCTGGC GAAGCAAACA TTGGATGGGC AGAAATACTT TACAACGATT
AGTCGAGACG AAATGGATCG TATTTTAGAC GAACAGAAGC TGCAATATAG CGGCGTCGTT
AATGATTCAA AGATCGTTGA AGCCGGAGAA ATTTTAGGCG CGCAAGCATT TATTTCCGGT
GAAGTCATTT CCGCATCGGT CAAAGATAAC CGTCATTATG AAAAGCGTAC CAAATGCGTC
GATGATAATT GTAAAACAAC TCGGGCTTAT TTGGTTTCCT GTCTGAGTCG AACCATTGAT
TTGAGTGCGA ATATTAAAAT GACGGATGTG AGTAAGGCGG ATATTATTTA TGCCGATGCT
TATTCGAAAA GTTACCAGTG GAAGCACTGC CAAGATGATC GTAATGTTTT GCCGTCCAAG
TCTGATGGGC TGGCACGATT AGCCAATCTA GTTGCCAATG AATTTGTGTA TCAATTGACA
CCGCATTACA CCACTATGAC CGTCTCTCTG CTAGATGATC CTGATTTAGA CTATACCTCA
AAGCAAGAGA AAACATTAGA CGTCGCGATT GATTATATCG AAGCAGGGCG CTTGGATAAA
GCCGAGCAAT TATTAGGAAC GTTGTTAACT TCAACACAGA ATCGATCGTA TGTCGCGGCT
TATAATTTAG GGGTGGTCAA AGAAGCGCAA GGTGAGCTGG AAGATGCAAA GCGCCTTTAT
TTAATGGCAG ATCAACTGCA GCAAGAACCG GTTGATGAAA TTAACCAAGC TGTGGTTCGA
ATTGATCGAA TCATGCTGAA CCGCGAAAAA GCGTTATCAC AAATTTCTCA ATAA
 
Protein sequence
MSLWMKGTFF ALTAWAVMSI TGCSKNVKIQ VLEPAKIDRA AQTKQIAVSD FKDDTVGLAG 
KIEALLAKQT LDGQKYFTTI SRDEMDRILD EQKLQYSGVV NDSKIVEAGE ILGAQAFISG
EVISASVKDN RHYEKRTKCV DDNCKTTRAY LVSCLSRTID LSANIKMTDV SKADIIYADA
YSKSYQWKHC QDDRNVLPSK SDGLARLANL VANEFVYQLT PHYTTMTVSL LDDPDLDYTS
KQEKTLDVAI DYIEAGRLDK AEQLLGTLLT STQNRSYVAA YNLGVVKEAQ GELEDAKRLY
LMADQLQQEP VDEINQAVVR IDRIMLNREK ALSQISQ