Gene Tcr_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1978 
Symbol 
ID3761178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2172940 
End bp2173956 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content48% 
IMG OID637786727 
Productbiotin synthase 
Protein accessionYP_392242 
Protein GI78486317 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGG GTGACGTTCG CAACGATTGG ACTCTCGAAG AGATTAAAGA CATTATGAAT 
CAACCGTTTA ATGACTTGAT GTTTCAAGCG CAAACGGTTC ATCGTCAGCA CTTTAATCCA
AATGAAATCC AAACCAGCAC TCTGGTTAAC ATTAAATCCG GCGGCTGCGC GGAAGACTGC
GCCTATTGCT CGCAAAGTGC TCGCAATCAA ACCGAAGTCG AGAAAGAGCA GATGATGGAA
GTACAAGAAG TCATCGAACA AGCCATGGCC GCCAAAGAAA AAGGGGCTAC CCGTTTATGC
ATGGGCGCGG CGTGGCGAAA CCCAACCAAA AAAGACTTTC CTCGCGTACT GGAAATGGTG
CGTGTCGTTA AAGACTTAGG GCTGGAAACC TGTCTCACCC TCGGTATGCT GAATGATGAT
CAAGTCAAAC AGCTGAAGGA AGCTGGACTG GATTACTACA ACCACAACCT GGATACGTCA
GAAGCGTTTT ACCCTAAAAT CATCACCACA CGAAGCTATC AAGACCGCTT GGATACCATT
GATAAAGTAC AGGAAGCCGG TATCAATGTC TGTTCTGGCG GCATCATCGG CATGGGCGAA
CAACACAAAG ACCGCGCCGA ACTCATCCGC ACCTTCGGCA CCATGCGCCA CCATCCTAAT
TCGGTTCCCA TTAACTTGTT GGTGCCGGTT GAAGGAACAC CTTTAGCGCA TATGAAAGAT
AAAACTGATT CATTCGAATT TATTCGTGTC ATTGCCACCG CGCGTATTGT CATGCCACAA
ACCTATGTCC GTTTGTCTGC AGGCCGAATG GAACTGACGG ATGAAGCGCA AGCGTTATGC
TTTCTGGCAG GTGCCAACTC CATCTTTTAT GGTGATAAGC TGTTGACGAC AGACAACCCA
GAGGCTGGGC ATGATGAACA GTTGTTTGCG AAGCTCGGAA TTCAAATGCA ACAAAATGCC
AAAGTAGAAG CCGCGGCCAA AAAACTCGCT GAACAAACCA CAGAGCTGAC CGCCTAA
 
Protein sequence
MALGDVRNDW TLEEIKDIMN QPFNDLMFQA QTVHRQHFNP NEIQTSTLVN IKSGGCAEDC 
AYCSQSARNQ TEVEKEQMME VQEVIEQAMA AKEKGATRLC MGAAWRNPTK KDFPRVLEMV
RVVKDLGLET CLTLGMLNDD QVKQLKEAGL DYYNHNLDTS EAFYPKIITT RSYQDRLDTI
DKVQEAGINV CSGGIIGMGE QHKDRAELIR TFGTMRHHPN SVPINLLVPV EGTPLAHMKD
KTDSFEFIRV IATARIVMPQ TYVRLSAGRM ELTDEAQALC FLAGANSIFY GDKLLTTDNP
EAGHDEQLFA KLGIQMQQNA KVEAAAKKLA EQTTELTA