Gene Tcr_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1973 
Symbol 
ID3761173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2168115 
End bp2168603 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content42% 
IMG OID637786722 
Producttwin-arginine translocation protein TatB 
Protein accessionYP_392237 
Protein GI78486312 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.268413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATA TTGGTTTTTT AGAAATCATC GTCATTATGG TCATCGCACT CATCGTCATT 
GGCCCTGAGC GTATGCCTGA AGTGGCTCGG AAAATTGGGC AATTCATGGG AAAAACCAAA
CGGTTTATCA ATTCCATGAA AGAAAACAGT GAAATCACTG AAACCGTGCG CGATTTGCAA
AATTCCATGA ATCTTGAAGA AGAGAAACGA AACCTTGAAA GCGTCAGCGA TACGCTTCAT
GATGACTTTT CTAAAATTCA AGATGAGTTT GGCATAGATC AAGAAATTTC CCGTCCTTTT
GACGCGGATG AACCGACAGC ATTTTCAGGC ACGCAATTTA ATAAAGCGCC TACACAGCCT
AAAATGCCAA CCACTGAAGA ATCACCCTCT TCAACACCAG AAACAAGCAC AAAAGAGACT
GAAAAAACCA GTACATCGGA CGTGTCGGCG CCTTCTGAAT CCACACCTGA AAGTTCGAAC
AAATCATGA
 
Protein sequence
MFDIGFLEII VIMVIALIVI GPERMPEVAR KIGQFMGKTK RFINSMKENS EITETVRDLQ 
NSMNLEEEKR NLESVSDTLH DDFSKIQDEF GIDQEISRPF DADEPTAFSG TQFNKAPTQP
KMPTTEESPS STPETSTKET EKTSTSDVSA PSESTPESSN KS