| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1967 |
|---|
| Symbol | |
|---|
| ID | 3761167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2164820 |
|---|
| End bp | 2165461 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637786716 |
|---|
| Product | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| Protein accession | YP_392231 |
|---|
| Protein GI | 78486306 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.275388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATC AAAAACTGGT AACCGTTATA GACTATGGCA TGGGAAACCT GCGCTCTGTT
GCTAAGGCAG CCGAGCATGC AGCTGACAGC AATACTCGAA TCTGTATCAG TGATAAAGCC
GAGGATATCC GCTCGGCTGA CGCGATTATT TTTCCAGGGC AAGGCGCCGC TAAAGCGTGC
ATGAAAGCAT TAAATGAAAC AAATATCACC CATGCGCTAA TCCAGGCCGC GACTGAAAAA
CCTTTTTTAG GCATTTGCAT GGGGCTTCAA GTTTTAATGA CCCATAGCCA AGAAAATGAA
GGCGTTGATT GCCTTGATAT TCTAAAAGGG GATGTTCAGA AGTTTGATCT CAGCGGCCAT
CCGGAACTTA AAATGCCGCA CATGGGATGG AACCAGATCC ATCAAACAAT CGATCACCCT
TTGTGGCACA ACATTGAACA AAACAGTCGA TTTTATTTCG TGCACAGCTA CTTTGTCAGC
CCGCATGACA AACAAATCAT CGCTGGAGAA ACCACTCATG GAAAAAGGTT TACATCCGCC
ATTGCACAAA ACAATTTATT TGCCATTCAA GCGCACCCTG AAAAAAGCGC CGACGCTGGC
TTACAACTCT TTAAAAACTT CCTAAACTGG AACGGGCAAT AA
|
|---|
| Protein sequence | MTDQKLVTVI DYGMGNLRSV AKAAEHAADS NTRICISDKA EDIRSADAII FPGQGAAKAC
MKALNETNIT HALIQAATEK PFLGICMGLQ VLMTHSQENE GVDCLDILKG DVQKFDLSGH
PELKMPHMGW NQIHQTIDHP LWHNIEQNSR FYFVHSYFVS PHDKQIIAGE TTHGKRFTSA
IAQNNLFAIQ AHPEKSADAG LQLFKNFLNW NGQ
|
|---|
| |