| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1965 |
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| Symbol | |
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| ID | 3761165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2162404 |
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| End bp | 2163834 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637786714 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_392229 |
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| Protein GI | 78486304 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.18845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACTA CAGCAAAACC ACAATATGAT GATGGTGTGG TTAAGTACTT AGCTGTTGGT
GCGATTACGT TTTTGGTACT AGGGACCTTT TTGGGAACTT TTGCCGCAGC GCAATTAGCA
TGGCCAGCTT TAAACTTCGA TATTGCAGAA ATTACTTTTG CAAGATTGCG TGTAATGCAT
ACAAATACCG TTATTTTTGC TTTTGGTGGT ATGACATTGA TGGCAACAGC TTACTATACT
GTTCAGCGTA CCAATGGGGT GAGGCTTTGG AGTAATGGGA TGGCATGGGT AAATGCCATT
TTATTTACAA TCGGCTTATT AGCGGTTGTG GTAACTATTT CTCTAGGGAT GACAACGGGT
AAAGAGTATC ACGAGCAAGA GTGGCCATTG GCGATTGCCA TTGCATTAGT TTGGACGTTA
TACACGTTAA ACTTTGTAAT GACGATTGCT TCTCGAAATA AAGAAACTCA TCCGAACGTT
TATGTTTCAA ACTGGTTCTT TATGGGGATG ATGATTGCGA TCACTTATCT TTATGTCGTT
AACGGTCTTG CCATTCCAGT CTCTATGTTC CGTTCTTATT CACTGTTCGC AGGTGTTCAA
GATGCCATGA TTCAATGGTG GTGGGGGCAT AACGCAGTTG GTTTCTTCCT GACAGCTGGT
TTCTTAGCGA TCATGTACTA CTTTGTTCCT AAGCAAGCAC AACGTCCTAT TTATTCTTAC
CGTCTATCTG TTATCCATTT CTGGGCATTA ATGTTCGGTT ATGTTTGGTT AGGTGCTCAC
CATTTGCAAT ACACAGCATT ACCTGACTGG ACTGGATCTT TGGGAGCGGT TATTTCTTTG
GCAATGATCA TTCCTTCTTG GGGTGGAGCG CTTAACGGGA TGTTAACGCT TTCAGGTGCT
TGGGATAGAC TTCGTACGGA TTATATCTTG CGATTCTTGA TTATTGCTTT GGCCTTCTAT
GCAATGTCTA CGTTCGAAGG GCCTGTTATG GCAGCCAAAA CAGTTAATGC ACTTTCACAT
TATACGGATT GGACGATTGG TCACGTTCAC TCAGGTGCGT TAGGTTGGGT TGCAATGGTG
TCTATCGGTG CGCTTTACCA TATGGTTATG AAATTATGGA ATACCGAAAT GTATTCTATG
AAGTTAATTA ACTTCCATTT CTGGTTAGCG ACAATTGGTA CAGTGTTCTA TATCGTAGCG
ATGTGGGTAT CCGGTATTAT GCAGGGGCTG ATGTGGCGTG CTTATGATGA GTACGGTACG
CTTGCATATA CTTTTGCTGA GTCTGTTGCG GCGATGCATC CATACTATGT CATGAGAACA
GTGGGAGGGC TTTTGTTCTT CTCTGGTGCG GTGGTAATGT TGTATAACGT TATTATGACA
ATCCGTATGG CGAATGCGAA GGAAACGGCA GGGGCAACAG CCAACGCTTA A
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| Protein sequence | MDTTAKPQYD DGVVKYLAVG AITFLVLGTF LGTFAAAQLA WPALNFDIAE ITFARLRVMH
TNTVIFAFGG MTLMATAYYT VQRTNGVRLW SNGMAWVNAI LFTIGLLAVV VTISLGMTTG
KEYHEQEWPL AIAIALVWTL YTLNFVMTIA SRNKETHPNV YVSNWFFMGM MIAITYLYVV
NGLAIPVSMF RSYSLFAGVQ DAMIQWWWGH NAVGFFLTAG FLAIMYYFVP KQAQRPIYSY
RLSVIHFWAL MFGYVWLGAH HLQYTALPDW TGSLGAVISL AMIIPSWGGA LNGMLTLSGA
WDRLRTDYIL RFLIIALAFY AMSTFEGPVM AAKTVNALSH YTDWTIGHVH SGALGWVAMV
SIGALYHMVM KLWNTEMYSM KLINFHFWLA TIGTVFYIVA MWVSGIMQGL MWRAYDEYGT
LAYTFAESVA AMHPYYVMRT VGGLLFFSGA VVMLYNVIMT IRMANAKETA GATANA
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