| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1960 |
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| Symbol | |
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| ID | 3761160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2155432 |
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| End bp | 2157918 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637786709 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_392224 |
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| Protein GI | 78486299 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAT CCTGTTATCA TTGCGGTCAA GGCATTAATC AAGGTGCCTT GGTTCTACGC
GAAATCAACC AAGTTGAAAA AGAGTTTTGT TGTCATGGCT GTGCCGGTGT TTGTGAAGCC
ATTCATGAAG CTGGACTTGA AAGTTTCTAT CGAAGAACGC CAGAAGGAGA ACTCTTTTCA
CCTCCACCGC CTCCTAATAA AGACATTGAA TTTTTTGACT ACGATGAAGT TCAATCTCAA
TATGTGAATG AACTGGATCA GAAGCGTGAA ATCACTTTGA TTTCTGAAGC CATTCATTGT
GCAGCGTGCA TTTGGCTTAT TGAGCATACT CTGGCTAAGC TGGATGGTGT GCAGATGGCA
AAGGTGAATT TCACCAATAA GCAAATTAAA CTGCGTTGGG ATAATGATCA AATCAAGCTG
TCAGAAATCA TTCAAGAGTT AAACCGGGTT GGGTATGATG CCAACCCTTA TGATGCGTCC
AGCAGTGAAG AGGCATTTCG GAAAGCCAAT CGTGATTTGC TGTATCGATT AGGGTTTGCC
GGTTTTGCGA TGATGAATGT CATGTGGTTT TCCGTCGCAC TGTATGCCGG GGCGGATGAG
GACGCGGAGT TTAGGCATTA CTTCCACTGG ATTGAGTTCA TTATTGCAAC GATTACCTTA
GCCTATTCTG GTAAACCGTT TTTAGCTGGG GCGATGACGT CCTTGAAATC CCGTTCTGTA
GGAATGGATG TTTCGATTTC TCTTGGAATT TTAACCACCT ACTTCTACTC TTTCTGGGTC
ACAATTGATC CTTTGCATCC TGGTAATGTC TATTATGACA CGATGATCGA CTTTATGTTT
TTACTGTTGA TCGGACGATA TTTAGAGGCC ATTTCCAAAA ACAAAGCCAT TGATTCAACA
CGGCGCCTTA TGGATCTGCA GCCAAAAGTT GCTCGTCTGA AAATCAGTGA TGGTATCGAA
GTGGTTCCCG TTAGGAAACT TAAAACCGGT GACGTGGTAT TAGTAAAGCC GGGCGATCAG
GTGCCTGTAG ACGGGGAGGT TGTTGAAGGT ACGGGTAATG TCAATGAATC CATGCTGAGT
GGGGAGTCTC GAGAAGTCTT TAAGGCATCG GGTTCCAGTG TGTCGGCTGG AACTTTAAAT
CTGGATGGAG CCTTGTCCAT CAAAGTGACT TCGATCCTTC AAGATACGCT TTTAGGAAAA
ATCGTTCACA TGGTAGAGGA TGCACAAGGT TCCAAAGCAC CCATTCAATG CACCGCTGAA
AAAATCATGC CTTGGTTTGT GTCGGTAGTG ATCGCATTAG CCACCCTTAG TTTTGTTTAT
TGGATCGTTA GTGCCGATTT AGAAACGGCG ATGATTGCGG CAACTTCAGT GTTGATTATT
ACTTGTCCTT GTGCGTTTGG CTTAGCTACA CCTATGGCCA CAGCTGTCGC TTCGGGGGTT
TCTGCTCAAA ATGGAATCTT AATTAAAAAT GGGGCTGTGC TGGAAATTCT GAACAGCATT
GATCATTTTG TATTCGATAA AACGGGAACC TTAACCAAAG GACAGATGCA GCTCAAAGAT
TACAGTTTGT ATGATGTTGA AAATGAATAC GAATTGCTTA AAGACTTAGT CAAAGTTGAG
TTTCATTCAG AGCATTCACT CGGTAAGGCG ATTGTACAAA GTTTGCAGGA TCAACATCCG
GAGTTTAAAA CCTTGGATAT GACAACCACC TATTTTCAAG CACACCCTGG AAAAGGCGTG
GAAGCGAAGG TACAGGATCG TCATTATCAG ATCGGTACCT CACTGTGGCT AGAAGGCTTT
AAGTTAGCCA TTCCTGATCG ATTACGCGCA CTTGAAATGG AAAAAGCTCA GCTCGGTCAA
ACCAGTGTGT GGGTGGCTCA AAATAACCGT ATTGTGGCGA TTTTATTCTT AGAGGATGAG
ATTCGAGATG ATGCGGCTGA AATGATTCAA CGCCTTAAAC AGCGTGGTAA AAAGGTCACT
CTGTTGAGTG GCGATCGTCA GTTGGTAGCG GAAACTGTGG CAGATCGGCT TGGTGGCATG
GCATTGCAGG CAGAGGTTTT GCCTGAACAA AAACACTTGG CGATTCAAAA TTTTCAAAAA
GACGGTCAGA GAGTTGCGAT GGTTGGGGAT GGGATTAATG ATGCGCCAGC CATGGCGCGT
GCCGATGTCA GTATTGCGTT AGGCTCTGGT ACGGATGTGT CTATGGATTG CGCAGACATT
GTCTTGTTAA ACAATGAATT ATTGTCGGTG GATACAGCAA TTGATTTATC AGAACGAACT
TTGAAAACGA TTAAAGAAAA TATCGCCAGT TCAATTATTT ATAATATCAC ACTGGTGCCT
TTGGCCATGG CAGCGATGTT GACGCCATTG ATTGCGGCGA TAACTATGCC ATTAAGCAGT
CTTGTTGTGA TTGGGAATGC GGCACGAATT CGATCGTTTT ACAGCAAAAA AGCCATAGCG
AAACGTCATC AAAAACCGTT AGAATGA
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| Protein sequence | MNQSCYHCGQ GINQGALVLR EINQVEKEFC CHGCAGVCEA IHEAGLESFY RRTPEGELFS
PPPPPNKDIE FFDYDEVQSQ YVNELDQKRE ITLISEAIHC AACIWLIEHT LAKLDGVQMA
KVNFTNKQIK LRWDNDQIKL SEIIQELNRV GYDANPYDAS SSEEAFRKAN RDLLYRLGFA
GFAMMNVMWF SVALYAGADE DAEFRHYFHW IEFIIATITL AYSGKPFLAG AMTSLKSRSV
GMDVSISLGI LTTYFYSFWV TIDPLHPGNV YYDTMIDFMF LLLIGRYLEA ISKNKAIDST
RRLMDLQPKV ARLKISDGIE VVPVRKLKTG DVVLVKPGDQ VPVDGEVVEG TGNVNESMLS
GESREVFKAS GSSVSAGTLN LDGALSIKVT SILQDTLLGK IVHMVEDAQG SKAPIQCTAE
KIMPWFVSVV IALATLSFVY WIVSADLETA MIAATSVLII TCPCAFGLAT PMATAVASGV
SAQNGILIKN GAVLEILNSI DHFVFDKTGT LTKGQMQLKD YSLYDVENEY ELLKDLVKVE
FHSEHSLGKA IVQSLQDQHP EFKTLDMTTT YFQAHPGKGV EAKVQDRHYQ IGTSLWLEGF
KLAIPDRLRA LEMEKAQLGQ TSVWVAQNNR IVAILFLEDE IRDDAAEMIQ RLKQRGKKVT
LLSGDRQLVA ETVADRLGGM ALQAEVLPEQ KHLAIQNFQK DGQRVAMVGD GINDAPAMAR
ADVSIALGSG TDVSMDCADI VLLNNELLSV DTAIDLSERT LKTIKENIAS SIIYNITLVP
LAMAAMLTPL IAAITMPLSS LVVIGNAARI RSFYSKKAIA KRHQKPLE
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