| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1958 |
|---|
| Symbol | gltD |
|---|
| ID | 3761158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2153654 |
|---|
| End bp | 2155066 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637786707 |
|---|
| Product | glutamate synthase subunit beta |
|---|
| Protein accession | YP_392222 |
|---|
| Protein GI | 78486297 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAATG TAAGACAATT TTTAGAACTA GATCGCCAGC TTCCATCTAA GAAAGATGCG
ATGGAACGTA AGGGAAACTT TGAAGAAATT TACACGGAGT TTGATCCTCA ACGAGCCATG
GCGCAAGCTG ATCGTTGCCT TCACTGCGGA AACCCTTATT GTGAATGGGC CTGCCCTGTT
CACAACTATA TCCCTAACTG GTTAAAACTG GTGTCGGAAG GCAATATCAT TGAAGCGGCT
GAGCTGTCGC ACCAAACAAA CTCTTTACCG GAAATGTGCG GTCGAATCTG CCCGCAGGAT
CGTTTATGTG AAGAAGCGTG TACGTTAGAA GACACCAACT TCGGTGCCGT CACCATTGGT
GCGGTGGAAA AATACATCAC CGACACAGCC ACCGATATGG GCTGGACACC GACACTTGAT
AATGTCACGA TGACCGATAA AAAAGTCGCT ATCATCGGAT CAGGGCCTGC TGGGCTCGGC
TGTGCAGATA TCTTAATTCG TAACGGGGTT AAACCCATCG TATTTGAAAA AGAGCAAGAA
ATCGGTGGTC TACTGACATT CGGTATTCCA CAGTTTAAGC TTGATAAAGA CATTGTGGTT
AAACGTCGTA AGATTTTAGA AGGCATGGGG GTTGAATTCC ATTGCAACAC AGAAATTGGC
AAAGACATCG CCTTTGATAC CCTACTTTCT GACTACGATG CGGTTTTCTT AGGCATGGGA
ACTTACAAGC CAATGGCCGG ACGTTTCCCA GGTGAAGACT TGCCTCAAGT CTATAAAGCG
TTAGACTTCT TAATCGGTAA CGTTAAAAAC GAACTGAAGA TGGAACAACG CCCAGAACCT
TTTGTTTCAA TGAAAGGTAA GCGTGTTGTG GTATTAGGGG GTGGCGACAC CACTATGGAC
TGCACACGTA CGTCTATTCG CCAAGGCGCT TCTGAAGTGT ATTGTGTGTA CCGTCGAGAC
GAAGAAAACA TGCCAGGATC TCGTGCGGAA GTGAAAAATG CCAAGGAAGA AGGGGTTCAA
TTCAAATTCA ACCTGGCACC GGTAGAAGTC ATTGAAAAAG ACGGACAGGT CGCGGGCATT
AAAGTTATCC AAACTCGCAT GGGCGAACCA GATGAAAACG GTCGTCGTCG TGCTGAAATG
GTAGAAGGTT CTGAAACCAT TATTGACTGC GATGCTGTCA TCGTAGCCTT TGGTTTCCAA
CCAAGTCCAC CAGAATGGTT TAATGACTTC GATATTAACC TTACAGATTG GAGTACGGTG
GTTGCGGAAG AAGAATCGGA GTTTCCTTTC CAAACATCGA ATCCTAAAAT ATTTGCTGGT
GGGGATATGG TACGTGGTTC AAGCCTTGTC GTTCACGCCA TCGCGGAAGG TCGAAAAGCC
GCTGAAGGAA TTTTAGATTA CCTTGACGTT TAA
|
|---|
| Protein sequence | MGNVRQFLEL DRQLPSKKDA MERKGNFEEI YTEFDPQRAM AQADRCLHCG NPYCEWACPV
HNYIPNWLKL VSEGNIIEAA ELSHQTNSLP EMCGRICPQD RLCEEACTLE DTNFGAVTIG
AVEKYITDTA TDMGWTPTLD NVTMTDKKVA IIGSGPAGLG CADILIRNGV KPIVFEKEQE
IGGLLTFGIP QFKLDKDIVV KRRKILEGMG VEFHCNTEIG KDIAFDTLLS DYDAVFLGMG
TYKPMAGRFP GEDLPQVYKA LDFLIGNVKN ELKMEQRPEP FVSMKGKRVV VLGGGDTTMD
CTRTSIRQGA SEVYCVYRRD EENMPGSRAE VKNAKEEGVQ FKFNLAPVEV IEKDGQVAGI
KVIQTRMGEP DENGRRRAEM VEGSETIIDC DAVIVAFGFQ PSPPEWFNDF DINLTDWSTV
VAEEESEFPF QTSNPKIFAG GDMVRGSSLV VHAIAEGRKA AEGILDYLDV
|
|---|
| |