| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1957 |
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| Symbol | gltB |
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| ID | 3761157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2149160 |
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| End bp | 2153641 |
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| Gene Length | 4482 bp |
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| Protein Length | 1493 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786706 |
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| Product | glutamate synthase subunit alpha |
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| Protein accession | YP_392221 |
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| Protein GI | 78486296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0244714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAC TCAACAGCTT ACAAGGTCTA TATTCTCCTG AATTTGAAAG AGAGAACTGT
GGTTTCGGCA TGATCGCCCA AATGGACGAC AAGCCTAGTC ATTGGGCGGT TCAAACAGCG
ATTGAGTCGT TAGCCAACAT GACTCACCGT GGTGGTGTTG CCGCAGACTG CTGCACCGGG
GACGGCTGTG GTTTATTGAT CAAAAAACCA AATACGTTCC TTCGCCAGGA AGCCAAAGAT
CTTGGGTTCA CCCTGTCTGA AAACTATGCC AGCGGCATGA TTTTCTTAAA CCAAGAAGCT
AATAAAGCAG CCTTTGCACG AGCTGAACTG GAAAAAGCAC TTGAATCAAA AGGGCTCAGC
ATTGCGGGTT GGCGAAAAGT ACCTGTCGCA TCAGAAGTAT TAGGCGCACA GGCGGCTGGC
ATGGAACCGT TAATTGAACA GGTTTATATC AACGCGCCTG TTGAGATGAG TGATGGCGAG
TTCAACCGCG CGCTATTTGT GGCCCGTCGT AAAACGGAAA TGGCCGTTGA GCCAAATGAT
GAAACGTTCT ACATCGCTTC CTTGCACAGC CAGTTGATTT CTTATAAAGG GTTGGTGATG
CCAAAAGAGC TTCCTGAGTT CTATTTGGAT TTAAAAGACG AACGATTCGA ATCGTCATTA
ATTTCTTATC ACCAACGTTT TTCAACCAAC ACCTTGCCAC AATGGCGTCT GGCCCAGCCT
TTCCGCTTCT TGGCACACAA CGGTGAATTG AATACCATCA AAGGGAACCG TAACTGGGCT
TTGGCACGTC AAAGTAAATT TGAAACGCCA TTGATTCCTG AGTTGTCAGA CTTAAAACCC
CTTGTGGCAC AAGAAGGTTC AGACTCCAAT TCTCTTGATA ACATGCTAGA AGTGTTGATG
ATGGGTGACA TGCCGGTTTT CCAAGCACTG CGCTTGTTGA TTCCGCCCGC TTGGCAAAAC
ATGCCACACA TGGATCCAGA TCTAAAAGCC TTCCTAGAAT ACAATTCCAT GCACATGGAA
CCTTGGGATG GCCCAGCCGG AATGGTTATC AACACAGGTA AGTATGCTAT TTGTGGTGTT
GACCGAAACG GGTTGCGTCC GACACGCTAT GTAATCACCA AAGACCGTCA CATTACTTTT
GCATCCGAAA TCGGTGTCTA CAATTATGCA CCGGAAGATG TGGTTGAAAA AGGTCGCTTA
AAGCCTGGAC AAGTCATCGC AGTTGATCTT GAAGCTGGAA AATTGCTTAA GCCGGAAGAC
ATTGATGCCG GTTTAAAAGC CGCCAAGCCA TATCGTGAGT GGATGGACAA AGGTTATATG
CACCTTGAAG AGCGTTTGGA CACGGAAGAC CACACGTTTG ACTGGGATAG CAATGAAGCC
GACATTTATC AGAAATATTA TCAAGTCACC TTTGAAGAAC GAGATCAGGT TATCCGAGTG
CTTGCTGAAG CCGGACAAGA AGCTACGGGC TCCATGGGCG ACGATGCCCC ATTACCGGTC
TTTTCTCATA AAGAACGCTC GGTGTTTGAC TATTTCCGTC AAATGTTTGC GCAGGTAACC
AACCCACCAA TTGATCCACT GCGTGAAAAC ATCGTCATGT CGTTGAACAC CTGTTTTGGC
CGTGAGCTCA ACATGTTTGA TGAAGGCGAA GACCATGCTC GTCGTTTAGA ATCGCAATCG
CCGATCTTAT CGCCATCGAT GATGAAACAC TTAACCAGCA TCGTGGATGA TAATTATCGT
AACCAGCGTA TTTCTTTGCA TTACAACCCT GAAAACACGG ACTTGAAAGC CGCAACCATT
GCGGTTTGTG ACCAAGCCGT AGAAGCGGTT AAAAGTGGCG TGACATTACT TATTTTAAGC
GACCTTAATA TCGAAAAAGG TCTGATCACA GTACCGGCTG CGATGGCAAC GGGTGCGGTG
CACCACCGCT TAATCTCTGA AGGTCTACGC CCTGAAGCAA ACATCATTGT TGAGACTGGA
ACGGCACGTG ACCCACACCA CTTTGCCGTG CTGTTTGGCT ATGGGGCAAC AGCGGTTTAC
CCTTATTTAG CGTATGAAAG CTTGCAGGAC ATGATCCGCA CCAAAGAACT TGACGAAAAA
GTTGGGATCT CAAAATACAT TAAAAACTAC CGTAAAGGGA TCAACAAAGG GTTGTTCAAA
ATCCTGTCGA AAATGGGGAT TTCAACCATT ACCTCTTACC GTGGTTCGCA ATTATTTGAA
GCCGTTGGTT TGAGCAAGGA AATCGTTGAT CTTTGTTTCA AAGGCACTCC GACTCGCATC
GAAGGGACAC GTTTTGAGCA TTTACAAGCA GACTTAATCA AGACGTCAAA ATATGCCTTT
AACCCACGTA AATTCTTACA ACCTGGTGGT TTACTGAAGT ATATCCATGG CGGTGAATAC
CATGCCTACA ACCCAGACGT TGTCAATTTC TTACGTGAAG CGGTTCAAAA AGGCGACCAA
ATCGCATACA ACAAATTTGC CAAACTAGTG AATGAACGCC CTGCGATGAC GGTTCGTGAC
CTGATCACTT TTAAAGACGG CCTTAAACCA ATTAATTTAT CAGAGGTTGA GCCAGTTGAA
TCTATTTATA AACGTTTTGA TTCTGCTGGG ATTTCGCTAG GCGCCCTTTC ACCGGAAGCA
CATGAAGCGC TGGCCATTGC AATGAACCGC ATTGGTGCTC GCTCAAACTC TGGGGAAGGT
GCTGAAGACC CGGCTCGTTA CGGCACGGAA AAAATGTCGA AAATCAAACA AATAGCATCC
GGTCGTTTTG GGGTCACTGC GCATTATTTA CGCAATGCTG AAGTTTTACA GATCAAAGTG
GCGCAAGGGG CAAAACCAGG TGAAGGTGGA CAACTTCCTG GGCATAAAGT CGATGCAACC
ATTGCAAAAT TGCGTCACTC GGTTGAAGGG GTTACCTTAA TTTCACCACC ACCGCATCAC
GACATTTATT CGATTGAAGA TTTGGCTCAG CTTATTTTCG ATCTGAAACA AGTCAACCCG
AATGCTTTGG TTTCGGTGAA GTTGGTTGCG GAGCCTGGTG TAGGAACCAT TGCGGCGGGT
GTTGCAAAAG CATATGCTGA CTTAATCACT ATCTCAGGTT ACGATGGTGG AACAGGGGCC
AGCCCACTGA CCTCAGTAAA ATACGCTGGA AATCCATTCG AAATGGGTCT GGCTGAAGCA
CACCAAGTAC TGCGTGCGAA TGATTTGCGT GGACAAGTCA TTCTACAAGC CGATGGTGGC
TTAAAAACGG GGTTGGATGT TGTCAAGGCG GCTATTTTAG GGGCGGAATC GTTTGGGTTC
GGTACGGCAC CAATGGTCGC TCTTGGCTGT AAATATCTAC GTATCTGTCA CTTGAATACC
TGTGCGGTGG GTGTAGCAAC GCAAGATGAA AGACTTCGTA AGGAACACTT CATCGGCATG
CCTGAAATGG TGATTAACTA TTTCCGCTTT GTGGCCGAAG AAACGCGTGA GTGGCTTGCC
AAGTTAGGCG TAGCCAGACT GGAAGATCTT GTTGGACGTG TTGATCTGCT TAAAATGATT
GATAAGCCTT TGACAGATAA ACAAACCAGT ATTGATTTGA CACCGTTCAT CACTGATGGT
GGCGTTCCGA AAGACAAACC TCAAACGGTA CAAGTCACTC GCAACAACCC TTGGGATGAT
GGTCATATTG CGGAAGAAAT GGTTAAAACC GTTTTGCCTG CCATTGAAAA TAAAACTGGT
GGCGAGTTTG GTTTCCACCT TGTGAATACA GGACGTTCAA TTGGCGCACG TATTGCAGGT
GAAATTGCAC AACGTTATGG CAACCACGGC ATGAAGGATG CGCCAATCAC ACTGTCTCTA
ACAGGAATCG CAGGTCAATC ATTCGGGGTG TTCAATGTGG ATGGGTTGAA CCTTTATTTG
GAAGGCGATG CGAATGATTA TGTTGGTAAA GGGATGTCCG GCGGTGAAAT CGTGGTTCGC
CCAGTAAAAG AACATGGCTT TGATCCTCAC AGTACCCCAA TTGTTGGGAA CACTTGTTTA
TATGGTGCAA CGGGTGGAAA ACTCTTTGCC AATGGTACGG GCGGCGAGCG TTTCGCTGTT
CGTAACTCGG GGGCGACAGC GGTCGTTGAA GGTTTAGGCG ACCATGGTTG TGAATACATG
ACTGGTGGTT GCGTTGTGAG TTTAGGCCAA GTGGGTGTCA ACTTCGGTGC CGGAATGTCT
GGCGGGATGG CTTTCATCTT AGACCTCGAC AGAACCTTAC CAGATCGCTT AAACACAGAA
ATGGTAGAAG CGGTTCGCAT TGATACCGAA TCAACGGAAG CATATCGTGT TTACTTACAA
GAACTACTGA CAGAATATGT TGAAAAAACC GGCAGTCAAT TTGGGCAAGA AGTTATCGAT
AATTTCAGTC GCTACTTGCA TAACTTCTGG TTAGTGAAAT CACGCGCCAT TAACGTTGAT
AAATTATTAG ATTTATTCGC CCACGGCGGT GACGGGGAAT AA
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| Protein sequence | MNSLNSLQGL YSPEFERENC GFGMIAQMDD KPSHWAVQTA IESLANMTHR GGVAADCCTG
DGCGLLIKKP NTFLRQEAKD LGFTLSENYA SGMIFLNQEA NKAAFARAEL EKALESKGLS
IAGWRKVPVA SEVLGAQAAG MEPLIEQVYI NAPVEMSDGE FNRALFVARR KTEMAVEPND
ETFYIASLHS QLISYKGLVM PKELPEFYLD LKDERFESSL ISYHQRFSTN TLPQWRLAQP
FRFLAHNGEL NTIKGNRNWA LARQSKFETP LIPELSDLKP LVAQEGSDSN SLDNMLEVLM
MGDMPVFQAL RLLIPPAWQN MPHMDPDLKA FLEYNSMHME PWDGPAGMVI NTGKYAICGV
DRNGLRPTRY VITKDRHITF ASEIGVYNYA PEDVVEKGRL KPGQVIAVDL EAGKLLKPED
IDAGLKAAKP YREWMDKGYM HLEERLDTED HTFDWDSNEA DIYQKYYQVT FEERDQVIRV
LAEAGQEATG SMGDDAPLPV FSHKERSVFD YFRQMFAQVT NPPIDPLREN IVMSLNTCFG
RELNMFDEGE DHARRLESQS PILSPSMMKH LTSIVDDNYR NQRISLHYNP ENTDLKAATI
AVCDQAVEAV KSGVTLLILS DLNIEKGLIT VPAAMATGAV HHRLISEGLR PEANIIVETG
TARDPHHFAV LFGYGATAVY PYLAYESLQD MIRTKELDEK VGISKYIKNY RKGINKGLFK
ILSKMGISTI TSYRGSQLFE AVGLSKEIVD LCFKGTPTRI EGTRFEHLQA DLIKTSKYAF
NPRKFLQPGG LLKYIHGGEY HAYNPDVVNF LREAVQKGDQ IAYNKFAKLV NERPAMTVRD
LITFKDGLKP INLSEVEPVE SIYKRFDSAG ISLGALSPEA HEALAIAMNR IGARSNSGEG
AEDPARYGTE KMSKIKQIAS GRFGVTAHYL RNAEVLQIKV AQGAKPGEGG QLPGHKVDAT
IAKLRHSVEG VTLISPPPHH DIYSIEDLAQ LIFDLKQVNP NALVSVKLVA EPGVGTIAAG
VAKAYADLIT ISGYDGGTGA SPLTSVKYAG NPFEMGLAEA HQVLRANDLR GQVILQADGG
LKTGLDVVKA AILGAESFGF GTAPMVALGC KYLRICHLNT CAVGVATQDE RLRKEHFIGM
PEMVINYFRF VAEETREWLA KLGVARLEDL VGRVDLLKMI DKPLTDKQTS IDLTPFITDG
GVPKDKPQTV QVTRNNPWDD GHIAEEMVKT VLPAIENKTG GEFGFHLVNT GRSIGARIAG
EIAQRYGNHG MKDAPITLSL TGIAGQSFGV FNVDGLNLYL EGDANDYVGK GMSGGEIVVR
PVKEHGFDPH STPIVGNTCL YGATGGKLFA NGTGGERFAV RNSGATAVVE GLGDHGCEYM
TGGCVVSLGQ VGVNFGAGMS GGMAFILDLD RTLPDRLNTE MVEAVRIDTE STEAYRVYLQ
ELLTEYVEKT GSQFGQEVID NFSRYLHNFW LVKSRAINVD KLLDLFAHGG DGE
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