| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1952 |
|---|
| Symbol | |
|---|
| ID | 3761152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 2144951 |
|---|
| End bp | 2145985 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637786701 |
|---|
| Product | glycerol-3-phosphate dehydrogenase (NAD(P)+) |
|---|
| Protein accession | YP_392216 |
|---|
| Protein GI | 78486291 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000241777 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAATAG CCAATAAACC TTTGACGATT GCCGTATTAG GTGCCGGTGC TTGGGGCTCG
GCATTGGCAA TCCATTTGTC TCGAATCGGT CATCAGGTCA AACTTTGGGA TCACAATCCC
GAGAACGCCG CAACGCTCGA GTCGGCAAGA GAAAATGTGC GCTATCTGAA AGGGGTGCCT
TTTCCAGACG CGTTAAGTGT GCAAAGTGAT TTAAAGGTGA CGCTAGCAGA CGTTGATGCT
GTTTTGATGG TGGTTCCAAG TCAGGCTTTT CGAGAGGTGC TTCAGAAAAT GCATCACATT
ATGATGGGCT CTAAAAGCCA TTATCATTTG GCCTGGGCCA CCAAAGGATT TGAGCCGGAA
ACCAGTTTGA TGCTGCATGA AATTGTGCAG CAAGAACTGG GTGAGCAGAT TTCTTTTGCC
GTGCTATCCG GTCCAACCTT TGCTGCGGAA GTGGCAAGAG GGTTGCCAAC CGCCATGGTA
AGTGCTTCGC GAGACCAGCA AGAAGCTCAA TTTTGGGCCG ATGCGTTTCA TTGCGACACC
TTTAGAATGT ACACGCAGTC TGATGTGGTC GGGGTTGAAA TTGGCGGTGC CTATAAAAAT
ATCATGGCCA TTGCGACGGG TTTGTCCGAC GGGTTGCGAT TGGGTGCGAA TGCACGAGCA
GCTCTGATTG GCCGTGGCAT GGTAGAAATG ATGCGGTTTG GGGATGCTCT CGGGGCCAAG
CATGAAACCA TGATGGGCTT GTCCGGATTG GGTGATTTGG TGCTGACGTG TACCGATGAT
TTGTCGCGTA ATCGTCGATT TGGTTTGATG TTGGCACAGT CACAGCGACC TGCTGAAGAC
GTGATTGAAG AGATTGGTCA AGTCGTTGAA GGGGTTAAAG CCGTGAAAGC CGTCAAGTTG
ATTGCGGACA AGTACCAGTT GGATTTGCCG ATCATGGAAC AGGTCTACAA TATTATTGTC
GGGCAAAGTA CCGCGGAACA AGCCGTGAAA GAGTTGATGC GTCGCCACGG TCGATCTGAG
CTAGAGTTCG GCTAG
|
|---|
| Protein sequence | MTIANKPLTI AVLGAGAWGS ALAIHLSRIG HQVKLWDHNP ENAATLESAR ENVRYLKGVP
FPDALSVQSD LKVTLADVDA VLMVVPSQAF REVLQKMHHI MMGSKSHYHL AWATKGFEPE
TSLMLHEIVQ QELGEQISFA VLSGPTFAAE VARGLPTAMV SASRDQQEAQ FWADAFHCDT
FRMYTQSDVV GVEIGGAYKN IMAIATGLSD GLRLGANARA ALIGRGMVEM MRFGDALGAK
HETMMGLSGL GDLVLTCTDD LSRNRRFGLM LAQSQRPAED VIEEIGQVVE GVKAVKAVKL
IADKYQLDLP IMEQVYNIIV GQSTAEQAVK ELMRRHGRSE LEFG
|
|---|
| |