Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1929 |
Symbol | |
ID | 3761123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2115066 |
End bp | 2116037 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637786672 |
Product | HPP |
Protein accession | YP_392193 |
Protein GI | 78486268 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.171366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAA GCAAGCTGCA TTCATTCATA GCCTTTTTGG GGATTAATCG TACCCAGGCA AGTCATCATG AAAAATTCAT TTCGGCATTA GGAGGCTTTC TTTCGATTCT ATTGATTTTA CTCATCAGTC GATCTTTTTT AGAGTTGTCG GCCAGTGTCG CACTGGTGGC CTCAATGGGG GCATCAGCTG TTTTGCTATT TGCTGTACCG CATGGTCCTT TGTCCCAACC TTGGCCTTTG ATCGGAGGCA ATCTGATTTC CGCTTTCATC GGGGTGAGCT GTGCGCTTTT AATCGACCCG CCGATTCTAG CCGCAAGTAC CGCCGTGGGC TTAGCCATCT TAGCGATGTA CTATTTTAAG TGCATTCATC CACCCGGTGG TGCCACCGCG TTAACCGCGG CCATTGGCGG TGAAAGCGTA CATGCTTTGG GCTATCAGTT TATCGTAACC CCCGTGCTTT TGAATGTGCT TTGCATCTTA ACAATTGCCA TTATTTTTAA CGCTCTTTTT CACTGGCGTC GCTACCCAGC TTATTTACAA CAGGCTTCTT ATTCGGCAAC CGGTACCCCA TCGCATGAAA ACCTGTCACA TGAAGATTTC ATCCATGCTT TGAAAGAAAT TGATTCGTTC GTTGATATTA ATGAACACGA TTTAAAACGC ATTTTTGAAC TGGCAAACCT CAATGCCAAC GCCATCCATC TTGACCCTGA AGACATTCAG CTTGGTGAAG TTTACAGTAA CGGAAAATTG GGGAAAGACT GGTCAATGCG ACAAATCATT GATGAATCAC GAAGTGACAA CCCTGCAAAA GACTATGTCA TTTTTAAACA GATTGCCGGA CAGGAAAAAA AGACCTCTGA CTGCATCACC CGAGCAGAAT TTGCGCGCTG GGCACAATAT CCGATGGTTA AAGAAAATGG TTTATGGCAT CGAAAGAGCG CACCAAACCA ATCAACCACC GGTGTGGAGT AA
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Protein sequence | MKPSKLHSFI AFLGINRTQA SHHEKFISAL GGFLSILLIL LISRSFLELS ASVALVASMG ASAVLLFAVP HGPLSQPWPL IGGNLISAFI GVSCALLIDP PILAASTAVG LAILAMYYFK CIHPPGGATA LTAAIGGESV HALGYQFIVT PVLLNVLCIL TIAIIFNALF HWRRYPAYLQ QASYSATGTP SHENLSHEDF IHALKEIDSF VDINEHDLKR IFELANLNAN AIHLDPEDIQ LGEVYSNGKL GKDWSMRQII DESRSDNPAK DYVIFKQIAG QEKKTSDCIT RAEFARWAQY PMVKENGLWH RKSAPNQSTT GVE
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