Gene Tcr_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1929 
Symbol 
ID3761123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2115066 
End bp2116037 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content45% 
IMG OID637786672 
ProductHPP 
Protein accessionYP_392193 
Protein GI78486268 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.171366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA GCAAGCTGCA TTCATTCATA GCCTTTTTGG GGATTAATCG TACCCAGGCA 
AGTCATCATG AAAAATTCAT TTCGGCATTA GGAGGCTTTC TTTCGATTCT ATTGATTTTA
CTCATCAGTC GATCTTTTTT AGAGTTGTCG GCCAGTGTCG CACTGGTGGC CTCAATGGGG
GCATCAGCTG TTTTGCTATT TGCTGTACCG CATGGTCCTT TGTCCCAACC TTGGCCTTTG
ATCGGAGGCA ATCTGATTTC CGCTTTCATC GGGGTGAGCT GTGCGCTTTT AATCGACCCG
CCGATTCTAG CCGCAAGTAC CGCCGTGGGC TTAGCCATCT TAGCGATGTA CTATTTTAAG
TGCATTCATC CACCCGGTGG TGCCACCGCG TTAACCGCGG CCATTGGCGG TGAAAGCGTA
CATGCTTTGG GCTATCAGTT TATCGTAACC CCCGTGCTTT TGAATGTGCT TTGCATCTTA
ACAATTGCCA TTATTTTTAA CGCTCTTTTT CACTGGCGTC GCTACCCAGC TTATTTACAA
CAGGCTTCTT ATTCGGCAAC CGGTACCCCA TCGCATGAAA ACCTGTCACA TGAAGATTTC
ATCCATGCTT TGAAAGAAAT TGATTCGTTC GTTGATATTA ATGAACACGA TTTAAAACGC
ATTTTTGAAC TGGCAAACCT CAATGCCAAC GCCATCCATC TTGACCCTGA AGACATTCAG
CTTGGTGAAG TTTACAGTAA CGGAAAATTG GGGAAAGACT GGTCAATGCG ACAAATCATT
GATGAATCAC GAAGTGACAA CCCTGCAAAA GACTATGTCA TTTTTAAACA GATTGCCGGA
CAGGAAAAAA AGACCTCTGA CTGCATCACC CGAGCAGAAT TTGCGCGCTG GGCACAATAT
CCGATGGTTA AAGAAAATGG TTTATGGCAT CGAAAGAGCG CACCAAACCA ATCAACCACC
GGTGTGGAGT AA
 
Protein sequence
MKPSKLHSFI AFLGINRTQA SHHEKFISAL GGFLSILLIL LISRSFLELS ASVALVASMG 
ASAVLLFAVP HGPLSQPWPL IGGNLISAFI GVSCALLIDP PILAASTAVG LAILAMYYFK
CIHPPGGATA LTAAIGGESV HALGYQFIVT PVLLNVLCIL TIAIIFNALF HWRRYPAYLQ
QASYSATGTP SHENLSHEDF IHALKEIDSF VDINEHDLKR IFELANLNAN AIHLDPEDIQ
LGEVYSNGKL GKDWSMRQII DESRSDNPAK DYVIFKQIAG QEKKTSDCIT RAEFARWAQY
PMVKENGLWH RKSAPNQSTT GVE