| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1923 |
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| Symbol | |
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| ID | 3761117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2105845 |
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| End bp | 2108541 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786666 |
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| Product | ATPase, E1-E2 type |
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| Protein accession | YP_392187 |
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| Protein GI | 78486262 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATGGT TTAACCAATC AGCCGATTCT GTTATCAAAG CCCTGGGTTC TGATCCCCAG
CAGGGCTTAT CGGAAGACCA CCGGTTACAA CGTCAAGCGT CGTTTGGACT GAATGAAATT
AGCCAGGCCA AACGTGCTTC CGCTCTTCGT ATTTTCATTA CCCAACTGAA AAACCCGTTA
CTCATCATTC TCGCACTGGG TGCCCTGCTA TCTTTTTATA CAGGGCATCA TATTGATGCC
ATAGCCATCA GTACCATCAT TCTAATCAAC GCGTCAATCA CCTTTATTCA GGAATATAAA
GCCCAAAAAT CGATCGATGC CTTGCGTGAT CTGTCAGCAC CGAAATGTCA TGTCAAGCAA
GACGGACGCT GGCAAGAAAT GCCGGCAAAG CAACTGGTTC CCGGAGACAT TATTCTCCTG
ACAAGCGGTG ACATCATCCC GGCTGACTGT CGATTGATTG AAACGACTCA ACTTGAAGTG
GATGAATCGG CGCTGACAGG CGAGTCGAAT CTCATCCACA AGCAAACGGC TACTTTAGAA
GCCGCCGCCT TAACATTGGG TGACCAGCTC AACATGGGAT TCATGAGCAC GCCTATTCAC
AATGGAAGGG CCATCGCCAT AGTGACGGCA ACAGGAATGA AAACCGAAGT GGGCAAAATC
GCTCAATTGA TAGAAACCAC TCAGAATCGA CTCACCCCTC TTCAAAGTCG CATTCATGCT
TTATCGAAAA CCCTTATCTG GGCCGCGTTA TTCATTGTGA CAATCATCAT TGGCATCGGG
TTCTACAAAG GTCTAACCCT ATCCGGCATG ATAGACACCA GTATTTCATT GGTTGTCGCA
GCCATTCCTG AAGGCCTGAC CACCGTTGTG ACCATCGTCT TAACATTGGG CGCAAAACAT
ATGATGCGTA ACAATGCGCT GGCAAAATAT TTGGCTTCCG TTGAGACCTT AGGTTCCACC
TCTGTCATCT GTACCGACAA AACCGGAACC CTAACTCAAA ATAAAATGCA ATCCGTTCAG
ATCTGGGCTG GTGGTGATCA CTATCATATT CAAGGGGAAG GATACCGCCC GATAGGAGAG
TTTAGTGATG CTCAGCAACA CCCTATTAAT CCACGCCATC ACCCTCACTT AAAACACTTA
CTGGAAATGT CAGCATTATG CAGTGAAGCG CAACTGATCG AACAGAAAGG CCGCTATCAC
ATTCAAGGCC TACCAACCGA AGGCGCGTTG GTGGTGGCCG CGGCAAAAGC CAACATCCAC
AAAGAGGCAT TACTGCAACA TCAAAAAATC ATTGCTACCT TTCCATTTGA TCCCAAACGA
AAAATGATGA GTGTCGTGAT ACAAGACGTG AATAATAACT ATAAACTGAT TGTTAAAGGG
GCTCCGGATG TCTTAATAAA CCACTCTGAA ATCATTGAGT TTCAAGATAA ACATTTAGAC
GTCACCAGTA ATCGACACCT TATTGAAGAA GTCATTCATG ACTTTGGCTC ACAGGCGTTA
AGAACCCTCG CCATTGGTTA CCGTCATCTC TCTGAAGATC AAATTCACTT GTCACAGGAA
GAACTTGAAC AACAACTAAC GTTTACAGGC CTGCACGGCA TCATTGATTT ACCGAGACCA
GAAGCCACAC AGTCCGTCAA AGAATGTCAT GATGCAGGCA TTCGAGTCAT CATGATTACA
GGTGATCATG CCGTCACGGC ACGAGCCATT GCCGAAAAAA TGCATATTAT TGATGCCAAT
AAAGAAGCCA TCGTTATCAC AGGAACGGAA TTAAATAACG TATCAGATGA AGAACTCGGA
CGTTTGGCAC CCAAAATTCA TGTCTATGCC CGTGTCACCC CTGAACATAA ATTGCGCATT
GTCAAAGCAC TGCAACAACA AGGAGACGTG ATTGCGATGA CCGGTGATGG TGTCAATGAT
GCGCCGGCAT TACGCAAAGC CGACATTGGC GTCGCCATGG GCGATACAGG AACAGGCGTA
GCGAAAGAGT CCGCCGATTT AATTTTGTTG GATGATAACT TTGCCACCAT CGTAACAGCG
GTTAGAGAAG GTCGCCGAAT TTATGACAAC ATCCGTAAAT TCATACGCCA AGATTTAACG
GCCAATGTCG GTGAAGTCTC CGCCATTTTA TTTGCTTTCT TATTGATCAG CGGCGAGCCT
CTCCTCGCTC TGGCCCCTTT AATGATTCTA TGGGTCAATC TGATCAGTGA TGGAATGCCT
TCTTTAGCGT TGGGAGTGGA CGTCGCTGAA GAAGATGTCA TGAAGCGTTC TCCACGCGAC
CCAAAAGACA GCTTTTTTGC TGACAATTTA GGCACTCGAA TTATTGCCCG AGGCTTGGTG
ATGGGCGGAT TTACTTTCTG GATGTTTCAG TATGCGCTTC ACATCGGTAT GACGTTAGAG
TATGCACAAA CGCTTGCCTT TATGACCCTA ATATTCGGTC AATTATTTCA TGTATTTGAT
GCTCGCACCT TTACAACACT CTATCGACGC AACCCCTTTA CGAACCGACT GTTGCTATTA
GCCGTATTTG GTTCTGGCGC ACTTTCCATT TTAATGGTTT ACACCCCCTT TGGAAATTTA
GCCTTAGGAA CGACTGCGCT TCAGTTGCAC CATTTGATCA TGACCTTTTT TATTGCAGCG
CTGCCCACCT TTATTTTATC GGGCCTCAAG GAGCTATTTA AATTTAAATG GTTATAA
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| Protein sequence | MTWFNQSADS VIKALGSDPQ QGLSEDHRLQ RQASFGLNEI SQAKRASALR IFITQLKNPL
LIILALGALL SFYTGHHIDA IAISTIILIN ASITFIQEYK AQKSIDALRD LSAPKCHVKQ
DGRWQEMPAK QLVPGDIILL TSGDIIPADC RLIETTQLEV DESALTGESN LIHKQTATLE
AAALTLGDQL NMGFMSTPIH NGRAIAIVTA TGMKTEVGKI AQLIETTQNR LTPLQSRIHA
LSKTLIWAAL FIVTIIIGIG FYKGLTLSGM IDTSISLVVA AIPEGLTTVV TIVLTLGAKH
MMRNNALAKY LASVETLGST SVICTDKTGT LTQNKMQSVQ IWAGGDHYHI QGEGYRPIGE
FSDAQQHPIN PRHHPHLKHL LEMSALCSEA QLIEQKGRYH IQGLPTEGAL VVAAAKANIH
KEALLQHQKI IATFPFDPKR KMMSVVIQDV NNNYKLIVKG APDVLINHSE IIEFQDKHLD
VTSNRHLIEE VIHDFGSQAL RTLAIGYRHL SEDQIHLSQE ELEQQLTFTG LHGIIDLPRP
EATQSVKECH DAGIRVIMIT GDHAVTARAI AEKMHIIDAN KEAIVITGTE LNNVSDEELG
RLAPKIHVYA RVTPEHKLRI VKALQQQGDV IAMTGDGVND APALRKADIG VAMGDTGTGV
AKESADLILL DDNFATIVTA VREGRRIYDN IRKFIRQDLT ANVGEVSAIL FAFLLISGEP
LLALAPLMIL WVNLISDGMP SLALGVDVAE EDVMKRSPRD PKDSFFADNL GTRIIARGLV
MGGFTFWMFQ YALHIGMTLE YAQTLAFMTL IFGQLFHVFD ARTFTTLYRR NPFTNRLLLL
AVFGSGALSI LMVYTPFGNL ALGTTALQLH HLIMTFFIAA LPTFILSGLK ELFKFKWL
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