Gene Tcr_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1905 
Symbol 
ID3761099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2085607 
End bp2086992 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content45% 
IMG OID637786648 
Productphosphomannomutase 
Protein accessionYP_392169 
Protein GI78486244 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.293066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACACG TTGAACCCAG TATTTTCAGA ACTTATGATA TTCGTGGCAT TGTTGATCAC 
GCTTTCACTG AAGAAACGGT GGAACTGATA GGAAAAGCGT TAGGGTCAGA ACTGGTTCGT
CAAAAAGAGA CTGAAATCGT TTTAGGGCGA GACGGTCGTT TGTCGGGTGA ACGCTTTTCA
AAGGCCATAA CAAAGGGGCT TCTTTCGGTT GGTGTTAACG TGATTGATTT GGGTCAGGTC
ATGACGCCAA TGGTGTATTT TGCGGCTGAA ACGTTGCCTA ACGTCCGCTC TTGTGTCGTG
ATGACTGGGT CTCACAATCC GCCAAATTAT AATGGCATTA AGATGGTGAT CAAAGGGATG
ACGCTTTATG GTGGGTATAT TCAGGCTCTT TTAAAGCGTA TCTTACAGAA TGACTTCGTT
ATGGATGCTC ATTTTGGGCG ATATTCGCAA CATGATATTG CCGCTGACTA TCAACACAGA
ATTGTTTCGG GAATTCATTT AGCACGGCCA TTGAAAATTG TTGTCGATGC TGGAAATGGG
GTCGCTGGGG CTTATGCACC TCAAGTTTTT CGAAAACTGG GGTGTGACGT CATTGAGTTA
TTTTGTGATG TGGACGGGCA TTTTCCGAAT CATCATCCTG ACCCTGCCAA ACTCAAAAAT
CTTCAAGACT TATCGGAAAA AGTGATTGAA ACCCAAGCGG ACATTGGGTT TGCCTTTGAT
GGCGACGGTG ACCGTTGTGG TGTCGTCGAT AACCAAGGCC AATCGCTTTA CCCTGATCGA
CAAATGATGT TGTTTGCTCA AGACATCCTT CGTCGACAGC CGGGAGCAGA GATTTTGTAT
GACATTAAGT GTACAGCCTT ATTACCCAAA GTGATACACG AAGCGGGTGG CAAAGCGACG
ATGTGGAAAA CCGGTCATTC CTTTATGAAA GCCAAAATGC GTGAGTCCGG TGCCGCGCTT
GGGGGAGAGG TTTCTGGCCA TATGTTTTTT AAAGAACGCT GGTACGGGTT TGATGATGGT
GTTTATACTG CTGCACGCAT GTCAGAGATT GTGGCTGGGC AAGCTTTAAC GTCATCGGAG
TTGTTTAATC AATTACCCGA TGCTTACAAT ACCCCGGAAA TCGATATTCC ATTTGCAGAA
GGGGAGCATT ACGCTTTTAT GAAAAAAATT GAAGCGATTG CTGACTTTCC CGAGGCGGAT
GTGTTTGATT TGGATGGCAT CCGAGCCGAT TTTAAAGACG GTTGGGGGCT GATTCGGCCT
TCGAATACCT CACCGGTTAT TGTCTTGCGT TTTGAAGGGA AAACACCGCA AGCACTTCAG
CGTATTCAAC AAAAATTTAA GGCGCTGATG TTAAAAGTGG ACCCAACTCT TTCGCTTCCA
TTTTAA
 
Protein sequence
MPHVEPSIFR TYDIRGIVDH AFTEETVELI GKALGSELVR QKETEIVLGR DGRLSGERFS 
KAITKGLLSV GVNVIDLGQV MTPMVYFAAE TLPNVRSCVV MTGSHNPPNY NGIKMVIKGM
TLYGGYIQAL LKRILQNDFV MDAHFGRYSQ HDIAADYQHR IVSGIHLARP LKIVVDAGNG
VAGAYAPQVF RKLGCDVIEL FCDVDGHFPN HHPDPAKLKN LQDLSEKVIE TQADIGFAFD
GDGDRCGVVD NQGQSLYPDR QMMLFAQDIL RRQPGAEILY DIKCTALLPK VIHEAGGKAT
MWKTGHSFMK AKMRESGAAL GGEVSGHMFF KERWYGFDDG VYTAARMSEI VAGQALTSSE
LFNQLPDAYN TPEIDIPFAE GEHYAFMKKI EAIADFPEAD VFDLDGIRAD FKDGWGLIRP
SNTSPVIVLR FEGKTPQALQ RIQQKFKALM LKVDPTLSLP F