Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1905 |
Symbol | |
ID | 3761099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2085607 |
End bp | 2086992 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637786648 |
Product | phosphomannomutase |
Protein accession | YP_392169 |
Protein GI | 78486244 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.293066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACACG TTGAACCCAG TATTTTCAGA ACTTATGATA TTCGTGGCAT TGTTGATCAC GCTTTCACTG AAGAAACGGT GGAACTGATA GGAAAAGCGT TAGGGTCAGA ACTGGTTCGT CAAAAAGAGA CTGAAATCGT TTTAGGGCGA GACGGTCGTT TGTCGGGTGA ACGCTTTTCA AAGGCCATAA CAAAGGGGCT TCTTTCGGTT GGTGTTAACG TGATTGATTT GGGTCAGGTC ATGACGCCAA TGGTGTATTT TGCGGCTGAA ACGTTGCCTA ACGTCCGCTC TTGTGTCGTG ATGACTGGGT CTCACAATCC GCCAAATTAT AATGGCATTA AGATGGTGAT CAAAGGGATG ACGCTTTATG GTGGGTATAT TCAGGCTCTT TTAAAGCGTA TCTTACAGAA TGACTTCGTT ATGGATGCTC ATTTTGGGCG ATATTCGCAA CATGATATTG CCGCTGACTA TCAACACAGA ATTGTTTCGG GAATTCATTT AGCACGGCCA TTGAAAATTG TTGTCGATGC TGGAAATGGG GTCGCTGGGG CTTATGCACC TCAAGTTTTT CGAAAACTGG GGTGTGACGT CATTGAGTTA TTTTGTGATG TGGACGGGCA TTTTCCGAAT CATCATCCTG ACCCTGCCAA ACTCAAAAAT CTTCAAGACT TATCGGAAAA AGTGATTGAA ACCCAAGCGG ACATTGGGTT TGCCTTTGAT GGCGACGGTG ACCGTTGTGG TGTCGTCGAT AACCAAGGCC AATCGCTTTA CCCTGATCGA CAAATGATGT TGTTTGCTCA AGACATCCTT CGTCGACAGC CGGGAGCAGA GATTTTGTAT GACATTAAGT GTACAGCCTT ATTACCCAAA GTGATACACG AAGCGGGTGG CAAAGCGACG ATGTGGAAAA CCGGTCATTC CTTTATGAAA GCCAAAATGC GTGAGTCCGG TGCCGCGCTT GGGGGAGAGG TTTCTGGCCA TATGTTTTTT AAAGAACGCT GGTACGGGTT TGATGATGGT GTTTATACTG CTGCACGCAT GTCAGAGATT GTGGCTGGGC AAGCTTTAAC GTCATCGGAG TTGTTTAATC AATTACCCGA TGCTTACAAT ACCCCGGAAA TCGATATTCC ATTTGCAGAA GGGGAGCATT ACGCTTTTAT GAAAAAAATT GAAGCGATTG CTGACTTTCC CGAGGCGGAT GTGTTTGATT TGGATGGCAT CCGAGCCGAT TTTAAAGACG GTTGGGGGCT GATTCGGCCT TCGAATACCT CACCGGTTAT TGTCTTGCGT TTTGAAGGGA AAACACCGCA AGCACTTCAG CGTATTCAAC AAAAATTTAA GGCGCTGATG TTAAAAGTGG ACCCAACTCT TTCGCTTCCA TTTTAA
|
Protein sequence | MPHVEPSIFR TYDIRGIVDH AFTEETVELI GKALGSELVR QKETEIVLGR DGRLSGERFS KAITKGLLSV GVNVIDLGQV MTPMVYFAAE TLPNVRSCVV MTGSHNPPNY NGIKMVIKGM TLYGGYIQAL LKRILQNDFV MDAHFGRYSQ HDIAADYQHR IVSGIHLARP LKIVVDAGNG VAGAYAPQVF RKLGCDVIEL FCDVDGHFPN HHPDPAKLKN LQDLSEKVIE TQADIGFAFD GDGDRCGVVD NQGQSLYPDR QMMLFAQDIL RRQPGAEILY DIKCTALLPK VIHEAGGKAT MWKTGHSFMK AKMRESGAAL GGEVSGHMFF KERWYGFDDG VYTAARMSEI VAGQALTSSE LFNQLPDAYN TPEIDIPFAE GEHYAFMKKI EAIADFPEAD VFDLDGIRAD FKDGWGLIRP SNTSPVIVLR FEGKTPQALQ RIQQKFKALM LKVDPTLSLP F
|
| |