| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1901 |
|---|
| Symbol | |
|---|
| ID | 3761095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 2081275 |
|---|
| End bp | 2082582 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637786644 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_392165 |
|---|
| Protein GI | 78486240 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCC AATCCTCCGC TGTTCGTCTG CAACAGCAAC ACCAGTTTGA CTCGTCTTTT
TCACAGAAAC AAAGTTTAAT GGTTGGCGAA ACAATTCGTC CACAGTTGTT AACAAACAGT
AATCAACGAG TAGAGTATCA ACAAACAGAA CGCTTTGAGT ATTCACATCA AAAGCAACGT
CAATATCAAT CGACCAGCCA AATCCTAGAG GGACAGCAAG AAACTGTTCT AAAGCAAAAC
CAGATCATTC AAGAGTTAGT GCAGTTAAGT CTGGTAGGTG AGTCTGCATC AGTGGCCTCT
CAAAAGGCGT TCCCTGCCAG TGATAAACCG TCAATTGAGG TCAGTGGTGA TGTCACGTTT
GATTTTACCC ATCAGCTCCA TCTTAAAACC TCGTCTTTTT CAGCCATGTC GGCCAGCGGG
CAAGTTGTAT TGAACGATGG GCGTTCAATC AATTTTAATC TGGTCACGTC GCACTCAGCA
AAAACCGATG TCTCAGCTGA AAGCAAGGCG TCTTTAAGTG TTGCATTAAT GCACGATCCA
TTAGTGATTA ACTTTGGAGT AGAGTCCGTG ACCTTGAACG ATCAGTTTTT TGAATTTGAT
ATGCAAGGAA ATGGAAGTCG ACAGCATTTC GCTCAGCTAG GCTCTGGAAG TGGTTTTTTG
GTGTTTGATG AAAACCAAGA TAATCAAGTC AATGACGGTA CCGAGTTGTT TGGTGCCCAA
AGTGGCAAAG CGTTCGCCGA CTTAGCCACA TTTGATGTGG ATGGCAATGG TTGGATTGAT
GAAGCGGATC CGATTTTTCA GCATTTGAAA TTGTGGACGG ATCAATCGGA TCAAACGCAT
TTGGTCAGTT TGGCTTCGAA GGGTGTCGGT GCCATTTATT TAGGCCATGT TGAACAGGGT
GAAGATTTAA TGGGCTCGCA AGGTGAGACG CTTGGACATG TTAAGTCGGC AGGGATTGTT
TTCATGGAAA ATGGTGCCGT ACAAACCGCA CAAGCTATTG ATTTGGCAGA GCATCAAGAT
GTTCAATTTT CAGAATCGTC CAATCGCCAT TCCCTTTTTT CAGCGTCGCA ACAGCAGGCG
TTAAAGGATT TTAGCGAGGC CATGAATACA CTTCAACAAG TCAGGTCAGA ACAAAGATTT
GAAATGAAGT TAACCAGCGT GAACACGCCT TTTATTTCTT TAGGCAGAGG ACAGGAGATG
GCTCAGGATG CCAAGCACTT TTTTGAACAA TTGCGTGAGC AGATACAGAA AATGATTGAG
CAACGTAAAG CCATTTTGGA TCGGATTCAG CAACGCTATT CTGCGTAA
|
|---|
| Protein sequence | MIIQSSAVRL QQQHQFDSSF SQKQSLMVGE TIRPQLLTNS NQRVEYQQTE RFEYSHQKQR
QYQSTSQILE GQQETVLKQN QIIQELVQLS LVGESASVAS QKAFPASDKP SIEVSGDVTF
DFTHQLHLKT SSFSAMSASG QVVLNDGRSI NFNLVTSHSA KTDVSAESKA SLSVALMHDP
LVINFGVESV TLNDQFFEFD MQGNGSRQHF AQLGSGSGFL VFDENQDNQV NDGTELFGAQ
SGKAFADLAT FDVDGNGWID EADPIFQHLK LWTDQSDQTH LVSLASKGVG AIYLGHVEQG
EDLMGSQGET LGHVKSAGIV FMENGAVQTA QAIDLAEHQD VQFSESSNRH SLFSASQQQA
LKDFSEAMNT LQQVRSEQRF EMKLTSVNTP FISLGRGQEM AQDAKHFFEQ LREQIQKMIE
QRKAILDRIQ QRYSA
|
|---|
| |