Gene Tcr_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1892 
Symbol 
ID3762428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2070375 
End bp2071883 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content46% 
IMG OID637786635 
ProductPpx/GppA phosphatase 
Protein accessionYP_392156 
Protein GI78486231 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACA CGACAGAATC ACAAAACATT TATGCCGCAA TCGATCTTGG CTCCAACAGT 
TTTCACATGA TGGTGGCTCG TGAAGTGCAT GGACAACTCC AGGTCATTGA TAAGCACAAA
GAGATGATTC GTCTTCGCTC TGGTTTGGAT AAAAAAGGCT ACCTGACCCC GGAAGCCTTT
CAAAGTGGAA TAGAATGCTT AGAGCGCTTT GGGCAACTTA TTAAAAATAT TCCGGGGCAT
CAGGTTCGCG CTGTTGGCAC CAACACACTT CGCAATGCCA AAAACAGTCA GGAATTTTTA
AGGCAGGCAC GTAAGGTTCT GGGCCATGAA ATCCAGATCA TCGCGGGCCA GGAAGAAGCT
CGTTTGATCT ACTTAGGTGT TGCACACGGC TTACCGCAAA ATGATGAACA GCGTTTAGTG
ATGGACATTG GTGGCGGAAG CACTGAATAC ATCATTGGTA AAAACTTCAA CTATCAACAT
TTAACCAGCA CCGAAATGGG CTGCGTCAGC ATTACCCAAC AGTTCTTTTC AAAACCTGAA
ATTACTGAAA AGCGGATGAC TAAGGCCATC TCCAATTGTC GACAAATCTT GCGCCCACAT
TTAACCAAAC TGACCAACCT AGGATGGGAC AGTGCGATCG GAGCATCCGG CAGCATCAAA
TCCATCGGCA CATTACTCAA AGAGAATGGC TGGACCGAAG GAGAAATCAC ATTAGAGGGC
ATGCTGAAAC TGAAAGAGGC CTTGATTCAA GCAGGGTCAA TTCAAGCGGC TACCTTGCTG
GGGCTAAAAG AAGAGCGTAT TCCTGTCCTA GCCGGTGGCT TAGCGATCCT AATCGCCACC
TTTGAAGAAC TGAAAATTGC ACAAATGCAG GTCTCTTCAA ACGCCCTTCG GGAAGGATTG
GTGTTTGATA CCTTAGGGCG TCTTTTTGCG GAAGATGTTC GTGAAACAAG TGTTGCAGCG
GCCCAGGCCT GGTTAAAAAT CGATACGGAG CAAGCCGAAG CGATTGCCCA CACCACCAAA
ACTTTTTACA AACAGGCGCA TAACAGTTGG CAGCTGCACG ATGCCGATTA CAACTACAAA
AAACTGTTGA TTTGGGCCGC TCAACTCCAT GAAGCGGGGA TGGCATTAAG TTATAAACGC
TATCGCCATC ACAGTGCGTA TTTGATTGAA AATTCAGAAT TGGCTGGTTT TACCCAGCAA
GAAAAACAAA TGCTGTCCAC CATGCTACTG AACCATCGTG GAAAATTCGT GCCGGAAGCT
TATGAACGGT TTGCGTCACC CCATAAAGAA AAGCTGAAAT ACCTCACCGT GTTATTACGT
CTGGCGGTTC GAATCCACCG AGGACGAGAA AAAGACATTC CGGATATTCT GCTTTACACA
ACAGGCGAAA AGACAATTCA TTTAGCCTTT GAAAAAGATT GGCTAACAGC GCATCCACTG
ACGCAAATGG ATTTAGAAAT TGAGGCCGAA CGTTTAGCGG GTGCCGACTT TATTTTGACT
TACGAATAA
 
Protein sequence
MTDTTESQNI YAAIDLGSNS FHMMVAREVH GQLQVIDKHK EMIRLRSGLD KKGYLTPEAF 
QSGIECLERF GQLIKNIPGH QVRAVGTNTL RNAKNSQEFL RQARKVLGHE IQIIAGQEEA
RLIYLGVAHG LPQNDEQRLV MDIGGGSTEY IIGKNFNYQH LTSTEMGCVS ITQQFFSKPE
ITEKRMTKAI SNCRQILRPH LTKLTNLGWD SAIGASGSIK SIGTLLKENG WTEGEITLEG
MLKLKEALIQ AGSIQAATLL GLKEERIPVL AGGLAILIAT FEELKIAQMQ VSSNALREGL
VFDTLGRLFA EDVRETSVAA AQAWLKIDTE QAEAIAHTTK TFYKQAHNSW QLHDADYNYK
KLLIWAAQLH EAGMALSYKR YRHHSAYLIE NSELAGFTQQ EKQMLSTMLL NHRGKFVPEA
YERFASPHKE KLKYLTVLLR LAVRIHRGRE KDIPDILLYT TGEKTIHLAF EKDWLTAHPL
TQMDLEIEAE RLAGADFILT YE