| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1888 |
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| Symbol | |
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| ID | 3762424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2064794 |
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| End bp | 2065996 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637786631 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_392152 |
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| Protein GI | 78486227 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.61283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAG TTTTTATTGG TCGCCAGCCG ATTTTAGATC AATCCATGAA AGTCTTTGCC
TATGAATTGG AGTTTCATCA AGGACTTAAT CCCAATCAAA CGACGGTTGC GGCCACGGAA
CAGCTTCTTC AAAAGACCGA AGAAGAGATT GGGTTTCAAT CAATCGTCGG TAAACACTCC
GCTTTGATGC AATTGCCCCG AGAATTGATT GCTCATGCCA AGCTTCCTGC TTTTGATTCG
AATCATCGTA TCGTATTAGA AATCCCCAAT GATGTAACGC ATGATGTTGA CATTTTAAAA
AGCCTTAAAG CCTTGAAACA GGAAGGATCG TCCATTGCGC TGGATAATTT TACCGATGAT
GAATCGAGTC AAAAGCTGGC CGCCATCAGT GATTATGTCA AAATAGATAA TGAAGCCTGT
TCTGAAGTGA AGATGAAATC AATGTTAAAA TCACTTCACG AGAAAGGTGT TAAAGTCATT
GCTGAAAAAG TTGAAACGGA AGAAATGTTC AACTACTTGA AAAAGATGGG GTTTGACTAC
TTCCAAGGGT ATTTTTTCAC CAATCCGGTG ATTATGAATG GCAACAAACT GTCTGGCAAC
AAGCTGACGT TATTGCAGCT TGTTTCAAAA ATAAATGACC CGAGTACCGG TTTTGAAGAA
CTTTCAAAGA TTTTAAGTCA CGATGTCGCT TTAAGCCACA AACTGTTGGT TGCGGTGAAT
AATCCGGCGG CGATGATCCC AATTAAAGTT GAAACCATTG CAGACGCCTT AAAGTATATG
GGGCTTAAGC GTTTGAAGTT CTGGGTGAAT ATGATGATGC TGTCTGATTT GGAAGATACA
CCAAAAGAGC TGCTGACAAC CTCCCTAGTT CGGGCAAGAT TTTGCGAAAA ACTCGCTGAG
AAATCTGGCC ACAGTCGTGA CAAAGACAGC TTCTTCTTAG TCGGTTTGTT TTCCAATTTA
GGCGCATTTT TCAGAGCCCC TATTGGATCG ATTGTGGAGG AAATGCCGTT GTCAGATGAC
ATTAAAGCCG CTCTCGTGGA CAAAAAAGGG CCGATGGGTG AGGCTTTAAA GTGCTTACAA
AAGCTGGAAT CAAATGACGC AAGCAGTATT GATTTAAGCT ATGAAACCGT CGGTATCAGT
GACATCGCTA ATCTTTTTAT GTCCGCATCT GCTTGGGCAC AACAAGCAAC AGACAATCTT
TAA
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| Protein sequence | MSEVFIGRQP ILDQSMKVFA YELEFHQGLN PNQTTVAATE QLLQKTEEEI GFQSIVGKHS
ALMQLPRELI AHAKLPAFDS NHRIVLEIPN DVTHDVDILK SLKALKQEGS SIALDNFTDD
ESSQKLAAIS DYVKIDNEAC SEVKMKSMLK SLHEKGVKVI AEKVETEEMF NYLKKMGFDY
FQGYFFTNPV IMNGNKLSGN KLTLLQLVSK INDPSTGFEE LSKILSHDVA LSHKLLVAVN
NPAAMIPIKV ETIADALKYM GLKRLKFWVN MMMLSDLEDT PKELLTTSLV RARFCEKLAE
KSGHSRDKDS FFLVGLFSNL GAFFRAPIGS IVEEMPLSDD IKAALVDKKG PMGEALKCLQ
KLESNDASSI DLSYETVGIS DIANLFMSAS AWAQQATDNL
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