Gene Tcr_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1876 
Symbol 
ID3761089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2051835 
End bp2052845 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content34% 
IMG OID637786619 
Producthypothetical protein 
Protein accessionYP_392140 
Protein GI78486215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGACG AAAGTAAAGT AGAAACAGGT GATTGGGCAA ATCTTTCGGA AATAGGTTGT 
TCTGAAGATT TTGGTTTATC AGGTGTTCCG TGTACTGGTA TTAAAATAAA GAATAATATT
TTTACGGCAA TTTCAGACCT TGAATTGATA AAGGTTCCAT TAAATGAGGG CAGGAAAAAT
GGTTCTCGAC AAAGTGGAGT AGTGTTTGAA AATTGTTTAT TTAAAGGGTT TACCTTAGAT
AAGATCGATT TTAACCTGAA ATTTATTGAT TGCGAATTTA AAGGTAATGT CCAATTAGAG
ACTGCAAAAG CAGTCAGTAT TTCTGATTCA GCTTTTAAAT CTATTGTTAA ATTTAAAGGG
TTAGATAGCA GGTATTCACA GATAGATTTA ACTAATGTCA CATTTTATGA AAATGTTAAA
TTTGAAGATT ATTTATTAGA GGACAGTGAA GATACTAGGG GCCATACGAG AATTAAGTCA
GCTTTTCGTG ATGTGGCGTT TCATAAAAAG TTGACGCTGA ATAATGTTTT GTTTCCGATG
GATATTGTCT TTGAGGCCGT GTCGTTACCT AAACGTATCG AGTCTGATCG TTCAACCTTT
AAAAGATTAA AAAGGGTTAT GGAGCATCAG CATAATTTCA TTGATGCGGC TTTTTTTCAC
AGTCTGGAAT TGAATGCATA TCGAGAAGAG CTAAATAATA AAAAATGGTT TGAAGCAGTT
GAAGATAAAG TTATTTTTGG ATTGAATTGG TACGCGTCCA AGTTTTCTTT AAGCTGGGCT
TTACCATTTT TTTGGATTGT GGTTTTGTCC GTAATTTTTT ACAGTGCGGC CATGTGCTGT
GATTCCGAAA TAGCATTTTC GTGTAATGCT TTTTTCCAGT TTATGAATCC ATTTAGTTGG
AATTCAAAAG CGTTTGATTC TGTTTATACA GTTTGGTTTT TACACAAATT GTTTGTGGTG
CCATTGGTAT ATTTGCTGAT TATTGCCATT AAACGAAAAA CCAAGCTTTA G
 
Protein sequence
MFDESKVETG DWANLSEIGC SEDFGLSGVP CTGIKIKNNI FTAISDLELI KVPLNEGRKN 
GSRQSGVVFE NCLFKGFTLD KIDFNLKFID CEFKGNVQLE TAKAVSISDS AFKSIVKFKG
LDSRYSQIDL TNVTFYENVK FEDYLLEDSE DTRGHTRIKS AFRDVAFHKK LTLNNVLFPM
DIVFEAVSLP KRIESDRSTF KRLKRVMEHQ HNFIDAAFFH SLELNAYREE LNNKKWFEAV
EDKVIFGLNW YASKFSLSWA LPFFWIVVLS VIFYSAAMCC DSEIAFSCNA FFQFMNPFSW
NSKAFDSVYT VWFLHKLFVV PLVYLLIIAI KRKTKL